RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 LMBR1Q8WVP7 490 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 DLG3Q92796 817 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZDHHC5Q9C0B5 715 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 B3GALT1Q9Y5Z6 326 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 A0A1W2PQ27 194 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 A0A1W2PQ64 194 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 A0A1W2PQC6 194 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 A0A1W2PQD8 194 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 PRR19A6NJB7 356 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 GPR3P46089 330 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 RTP1P59025 263 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 ODF1Q14990 250 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 CPZQ66K79 652 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 CC2D1AQ6P1N0 951 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 FRMD7Q6ZUT3 714 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 AMOTL1Q8IY63 956 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZZZ3Q8IYH5 903 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 LZTR1Q8N653 840 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 MORC4Q8TE76 937 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 MISP3Q96FF7 219 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 CARS2Q9HA77 564 aaKnown RBP6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 SP110Q9HB58 689 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 EBF1Q9UH73 591 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 NUB1Q9Y5A7 615 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
HMGB1P3-201ENST00000502802 LOC102724159A0A0B4J2E5 919 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 VCAM1P19320 739 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 CD40P25942 277 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 PTX3P26022 381 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 CYP2C19P33261 490 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 IKZF1Q13422 519 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 BIRC2Q13490 618 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 PWP2Q15269 919 aaKnown RBP6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 MINDY4Q4G0A6 757 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 GORABQ5T7V8 394 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 SLC4A10Q6U841 1118 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 DGKHQ86XP1 1220 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 CD244Q9BZW8 370 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZMAT4Q9H898 229 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 OBP2AQ9NY56 170 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 LMCD1Q9NZU5 365 aa6.9□□□□□ -1.3
HMGB1P3-201ENST00000502802 KLHL33A6NCF5 533 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 VSTM5A8MXK1 200 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 XPOTO43592 962 aaKnown RBP6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA12O60330 932 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 MAFKO60675 156 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 H2AFYO75367 372 aaKnown RBP6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 USP2O75604 605 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 LTFP02788 710 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 ZGLP1P0C6A0 271 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 TMEM132BQ14DG7 1078 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PDCD1Q15116 288 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 CHRNA2Q15822 529 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 CYP4F22Q6NT55 531 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PPP4R4Q6NUP7 873 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 CEP128Q6ZU80 1094 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 KCTD1Q719H9 257 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 EXOC8Q8IYI6 725 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 CMTR2Q8IYT2 770 aaKnown RBP6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 HSPBAP1Q96EW2 488 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 RPS6KC1Q96S38 1066 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 ADAMTS10Q9H324 1103 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 IMPACTQ9P2X3 320 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA9Q9Y5G4 932 aaKnown RBP6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA8Q9Y5G5 932 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA7Q9Y5G6 932 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA6Q9Y5G7 932 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA3Q9Y5H0 932 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 PCDHGA2Q9Y5H1 932 aa6.89□□□□□ -1.31
HMGB1P3-201ENST00000502802 KDM1AO60341 852 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 NTRK1P04629 796 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 EPHA5P54756 1037 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 GTF2H3Q13889 308 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 DOC2BQ14184 412 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 CLUL1Q15846 466 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 EFCAB2Q5VUJ9 269 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 STEAP3Q658P3 488 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 ESRP1Q6NXG1 681 aaKnown RBP6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 GALNT18Q6P9A2 607 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 KSR2Q6VAB6 950 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 ANKS4BQ8N8V4 417 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 CLIP3Q96DZ5 547 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 ACAP3Q96P50 834 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 NUP88Q99567 741 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 SMOC1Q9H4F8 434 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 PRDM11Q9NQV5 511 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 PDLIM7Q9NR12 457 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 FBLN5Q9UBX5 448 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
HMGB1P3-201ENST00000502802 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 SLC27A2O14975 620 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 TADA3O75528 432 aa6.87□□□□□ -1.31
HMGB1P3-201ENST00000502802 IL33O95760 270 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms