RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 FRMPD4Q14CM0 1322 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 UPP2O95045 317 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 CTSHP09668 335 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 ANTXR2P58335 489 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 ARHGAP4P98171 946 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 SP4Q02446 784 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
CNOT4-211ENST00000498534 APBB2Q92870 758 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 C17orf80Q9BSJ5 609 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 PSTPIP2Q9H939 334 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 LY9Q9HBG7 655 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
CNOT4-211ENST00000498534 NRCAMQ92823 1304 aa13.84□□□□□ -0.19
CNOT4-211ENST00000498534 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.83□□□□□ -0.2
CNOT4-211ENST00000498534 MEIS2O14770 477 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 PRC1O43663 620 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 CALM1P0DP23 149 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 CALM2P0DP24 149 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 CALM3P0DP25 149 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 SEMA3FQ13275 785 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 EPC2Q52LR7 807 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 FAM26DQ5JW98 314 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 RSPH3Q86UC2 560 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 RASEFQ8IZ41 740 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 MRPL38Q96DV4 380 aaKnown RBP13.83□□□□□ -0.2
CNOT4-211ENST00000498534 TMEM87BQ96K49 555 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 IFIH1Q9BYX4 1025 aaKnown RBP13.83□□□□□ -0.2
CNOT4-211ENST00000498534 UBE2ZQ9H832 354 aaPredicted RBP13.83□□□□□ -0.2
CNOT4-211ENST00000498534 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
CNOT4-211ENST00000498534 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 MAFGO15525 162 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 TCF7P36402 384 aaPredicted RBP13.82□□□□□ -0.2
CNOT4-211ENST00000498534 GPM6BQ13491 265 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 TAF2Q6P1X5 1199 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 TRIM50Q86XT4 487 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 TMEM192Q8IY95 271 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
CNOT4-211ENST00000498534 LMBR1Q8WVP7 490 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 SEPT1Q8WYJ6 367 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 GPRASP2Q96D09 838 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 IL17RAQ96F46 866 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 EPHX3Q9H6B9 360 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 RAPGEFL1Q9UHV5 662 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
CNOT4-211ENST00000498534 H3BNC9 293 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 KCNA5P22460 613 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 LIFRP42702 1097 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 ADAM17P78536 824 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
CNOT4-211ENST00000498534 LEXMQ3ZCV2 418 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 TMEM31Q5JXX7 168 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 RPAINQ86UA6 219 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 GLG1Q92896 1179 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 TNPO1Q92973 898 aaKnown RBP13.81□□□□□ -0.2
CNOT4-211ENST00000498534 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 SMARCAD1Q9H4L7 1026 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 ERAP1Q9NZ08 941 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 MICAL3Q7RTP6 2002 aa13.81□□□□□ -0.2
CNOT4-211ENST00000498534 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.8□□□□□ -0.2
CNOT4-211ENST00000498534 ATP9AO75110 1047 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 CHRNA1P02708 482 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 PPFIA1Q13136 1202 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 MTMR1Q13613 665 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 TIGD5Q53EQ6 642 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
CNOT4-211ENST00000498534 CCDC82Q8N4S0 544 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 FIBCD1Q8N539 461 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 BANK1Q8NDB2 785 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 OSBPL7Q9BZF2 842 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 EHMT1Q9H9B1 1298 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 TELO2Q9Y4R8 837 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 SIP14410 1827 aa13.8□□□□□ -0.2
CNOT4-211ENST00000498534 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-211ENST00000498534 GSTTP1A0A1W2PQM5 241 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 SH2B2O14492 632 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-211ENST00000498534 RPLP2P05387 115 aaKnown RBP13.79□□□□□ -0.2
CNOT4-211ENST00000498534 RB1P06400 928 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 KCNA2P16389 499 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 ITGB5P18084 799 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 GRIK4Q16099 956 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 PTCRAQ6ISU1 281 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-211ENST00000498534 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
CNOT4-211ENST00000498534 LRFN3Q9BTN0 628 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 PCDHA6Q9UN73 950 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 RWDD3Q9Y3V2 267 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 PCDHA8Q9Y5H6 950 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
CNOT4-211ENST00000498534 DOCK5Q9H7D0 1870 aa13.78□□□□□ -0.2
CNOT4-211ENST00000498534 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
CNOT4-211ENST00000498534 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
CNOT4-211ENST00000498534 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms