RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GDF5P43026 501 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 SKIDA1Q1XH10 827 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 MCF2L2Q86YR7 1114 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 KCND1Q9NSA2 647 aa6.48□□□□□ -1.37
SMC4-227ENST00000497984 CYR61O00622 381 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 GRK2P25098 689 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 CSF2RBP32927 897 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 GRK3P35626 688 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 NTRK3Q16288 839 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 KCNT2Q6UVM3 1135 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 LBX2Q6XYB7 198 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 RALYLQ86SE5 291 aaKnown RBP6.47□□□□□ -1.37
SMC4-227ENST00000497984 DCAF4Q8WV16 495 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
SMC4-227ENST00000497984 TINF2Q9BSI4 451 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 VPS11Q9H270 941 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 SEC61A2Q9H9S3 476 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 ZFP69BQ9UJL9 534 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 TCAF1Q9Y4C2 921 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 TESMINQ9Y4I5 508 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 SLC4A7Q9Y6M7 1214 aa6.47□□□□□ -1.37
SMC4-227ENST00000497984 MUSKO15146 869 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 NKRFO15226 690 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMC4-227ENST00000497984 AMHP03971 560 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 COL6A2P12110 1019 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 HSP90AA2PQ14568 343 aaPredicted RBP6.46□□□□□ -1.38
SMC4-227ENST00000497984 SPDYAQ5MJ70 313 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 CD276Q5ZPR3 534 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 OSBP2Q969R2 916 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 SGSM3Q96HU1 749 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 ARHGEF4Q9NR80 690 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 ST7Q9NRC1 585 aa6.46□□□□□ -1.38
SMC4-227ENST00000497984 IL18BPO95998 194 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 FGFR1P11362 822 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 GLRBP48167 497 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 HMGA2P52926 109 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 EPHA5P54756 1037 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 PFKPQ01813 784 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 GNL2Q13823 731 aaKnown RBP6.45□□□□□ -1.38
SMC4-227ENST00000497984 DDR2Q16832 855 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 GPR155Q7Z3F1 870 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 ZFPM1Q8IX07 1006 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 STPG3Q8N7X2 389 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 GNRHR2Q96P88 292 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 AARSD1Q9BTE6 412 aaKnown RBP6.45□□□□□ -1.38
SMC4-227ENST00000497984 KATNBL1Q9H079 304 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 SEMA4AQ9H3S1 761 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 ARHGAP20Q9P2F6 1191 aa6.45□□□□□ -1.38
SMC4-227ENST00000497984 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 ACOT7O00154 380 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 FOXS1O43638 330 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 FZD7O75084 574 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 FBXO21O94952 628 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 GNAT1P11488 350 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 GPR85P60893 370 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 ARID5AQ03989 594 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 SPIRE1Q08AE8 756 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 TCTN3Q6NUS6 607 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.44□□□□□ -1.38
SMC4-227ENST00000497984 KCNJ15Q99712 375 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 ZFYVE21Q9BQ24 234 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 MRIQ9BWK5 157 aa6.44□□□□□ -1.38
SMC4-227ENST00000497984 PRODHO43272 600 aa6.43□□□□□ -1.38
SMC4-227ENST00000497984 ENO2P09104 434 aaPredicted RBP6.43□□□□□ -1.38
SMC4-227ENST00000497984 STYK1Q6J9G0 422 aa6.43□□□□□ -1.38
SMC4-227ENST00000497984 REXO1L1PQ8IX06 675 aa6.43□□□□□ -1.38
SMC4-227ENST00000497984 PCED1AQ9H1Q7 454 aa6.43□□□□□ -1.38
SMC4-227ENST00000497984 DSEQ9UL01 958 aa6.43□□□□□ -1.38
SMC4-227ENST00000497984 BLACEA4D250 179 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 KLF4O43474 513 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 SOD2P04179 222 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 PABPC1P11940 636 aaKnown RBP6.42□□□□□ -1.38
SMC4-227ENST00000497984 ANKS3Q6ZW76 656 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 KCTD1Q719H9 257 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.42□□□□□ -1.382e-6■■■■■ 54.3
SMC4-227ENST00000497984 SH3RF2Q8TEC5 729 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 LMF1Q96S06 567 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 PTPN22Q9Y2R2 807 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 NUB1Q9Y5A7 615 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 ASXL2Q76L83 1435 aa6.42□□□□□ -1.38
SMC4-227ENST00000497984 ZNF888P0CJ79 500 aaPredicted RBP6.41□□□□□ -1.38
SMC4-227ENST00000497984 TCF3P15923 654 aa6.41□□□□□ -1.38
SMC4-227ENST00000497984 YOD1Q5VVQ6 348 aaPredicted RBP6.41□□□□□ -1.38
SMC4-227ENST00000497984 NSMFQ6X4W1 530 aa6.41□□□□□ -1.38
SMC4-227ENST00000497984 IFNL3Q8IZI9 196 aa6.41□□□□□ -1.38
SMC4-227ENST00000497984 LRRC37BQ96QE4 947 aa6.41□□□□□ -1.38
SMC4-227ENST00000497984 TACO1Q9BSH4 297 aaKnown RBP6.41□□□□□ -1.38
SMC4-227ENST00000497984 IPPKQ9H8X2 491 aa6.41□□□□□ -1.38
SMC4-227ENST00000497984 TCRBV5S4A2TA0A5A2 114 aa6.4□□□□□ -1.38
SMC4-227ENST00000497984 IQCA1LA6NCM1 817 aa6.4□□□□□ -1.38
SMC4-227ENST00000497984 H0Y858 1186 aa6.4□□□□□ -1.38
SMC4-227ENST00000497984 USP10Q14694 798 aaKnown RBP6.4□□□□□ -1.38
SMC4-227ENST00000497984 USP51Q70EK9 711 aa6.4□□□□□ -1.38
SMC4-227ENST00000497984 ST13P5Q8NFI4 369 aaPredicted RBP6.4□□□□□ -1.38
SMC4-227ENST00000497984 CD244Q9BZW8 370 aa6.4□□□□□ -1.38
SMC4-227ENST00000497984 ZFR2Q9UPR6 939 aaKnown RBP6.4□□□□□ -1.38
SMC4-227ENST00000497984 R3HCC1Q9Y3T6 440 aaKnown RBP6.4□□□□□ -1.38
SMC4-227ENST00000497984 FAM47E-STBD1D6RA91 191 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms