RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 CIITAP33076 1130 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 SP4Q02446 784 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 PTK7Q13308 1070 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 BFSP2Q13515 415 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 ME3Q16798 604 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 PSRC1Q6PGN9 363 aaPredicted RBP14.06□□□□□ -0.16
TRIM59-207ENST00000496222 SERINC5Q86VE9 423 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 REXO1Q8N1G1 1221 aaKnown RBP14.06□□□□□ -0.16
TRIM59-207ENST00000496222 DEFB123Q8N688 67 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 SEPT1Q8WYJ6 367 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 LENG9Q96B70 501 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 KIF2CQ99661 725 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 RNPEPQ9H4A4 650 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 MTMR10Q9NXD2 777 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 NFASCO94856 1347 aa14.06□□□□□ -0.16
TRIM59-207ENST00000496222 TRANK1O15050 2925 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 EIF5BO60841 1220 aaKnown RBP14.05□□□□□ -0.16
TRIM59-207ENST00000496222 LGR5O75473 907 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 ATG7O95352 703 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 FGBP02675 491 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 CKBP12277 381 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 TCF7P36402 384 aaPredicted RBP14.05□□□□□ -0.16
TRIM59-207ENST00000496222 MCTP2Q6DN12 878 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 TRIM22Q8IYM9 498 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 CCDC148Q8NFR7 591 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 SLKQ9H2G2 1235 aaPredicted RBP14.05□□□□□ -0.16
TRIM59-207ENST00000496222 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 REV3LO60673 3130 aa14.05□□□□□ -0.16
TRIM59-207ENST00000496222 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 GRXCR1A8MXD5 290 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 CPLX1O14810 134 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 TREHO43280 583 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 CCNE2O96020 404 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 FDPSP14324 419 aaKnown RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 SELPP16109 830 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 RFC2P35250 354 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 NEK4P51957 841 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 ST3GAL1Q11201 340 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 MBTPS1Q14703 1052 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 ANKRD1Q15327 319 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 UTP14CQ5TAP6 766 aaKnown RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 OTOP2Q7RTS6 562 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 RPUSD2Q8IZ73 545 aaKnown RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 FAM177A1Q8N128 213 aaPredicted RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 DAGLBQ8NCG7 672 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 BICD2Q8TD16 824 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 JPH1Q9HDC5 661 aaPredicted RBP14.04□□□□□ -0.16
TRIM59-207ENST00000496222 SETD4Q9NVD3 440 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 PCDHA4Q9UN74 947 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 NOD1Q9Y239 953 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 STK36Q9NRP7 1315 aa14.04□□□□□ -0.16
TRIM59-207ENST00000496222 IGKV6D-21A0A0A0MT36 114 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 C17orf102A2RUQ5 167 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 NBNO60934 754 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 CXCL10P02778 98 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 PFKMP08237 780 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 ACTR2P61160 394 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
TRIM59-207ENST00000496222 TCTN1Q2MV58 587 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 ZNF618Q5T7W0 954 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 DEFB128Q7Z7B8 93 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 RETREG2Q8NC44 543 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 GTF3C6Q969F1 213 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 EMSYQ7Z589 1322 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 UNC80Q8N2C7 3258 aa14.03□□□□□ -0.16
TRIM59-207ENST00000496222 KAT6AQ92794 2004 aa14.02□□□□□ -0.16
TRIM59-207ENST00000496222 GBF1Q92538 1859 aa14.02□□□□□ -0.16
TRIM59-207ENST00000496222 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.17
TRIM59-207ENST00000496222 PBX2P40425 430 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 NLRP5P59047 1200 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 MARCH8Q5T0T0 291 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 CPLX2Q6PUV4 134 aaKnown RBP14.02□□□□□ -0.17
TRIM59-207ENST00000496222 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 LRRC8DQ7L1W4 858 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 BLIDQ8IZY5 108 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 CCDC155Q8N6L0 562 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 LMBR1Q8WVP7 490 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 GUCD1Q96NT3 240 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 PHF20Q9BVI0 1012 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 PBX4Q9BYU1 374 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 OSBPL7Q9BZF2 842 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 SEMA6BQ9H3T3 888 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 GJB4Q9NTQ9 266 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.17
TRIM59-207ENST00000496222 KCNJ14Q9UNX9 436 aa14.02□□□□□ -0.17
TRIM59-207ENST00000496222 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
TRIM59-207ENST00000496222 MBLAC1A4D2B0 266 aaPredicted RBP14.01□□□□□ -0.17
TRIM59-207ENST00000496222 CDKL5O76039 1030 aa14.01□□□□□ -0.17
TRIM59-207ENST00000496222 DNAJB2P25686 324 aa14.01□□□□□ -0.17
TRIM59-207ENST00000496222 ZNF76P36508 570 aa14.01□□□□□ -0.17
TRIM59-207ENST00000496222 USP11P51784 963 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms