RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 SLC9A7Q96T83 725 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 RRN3P2A6NIE6 340 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 PRPF3O43395 683 aaKnown RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 SMAD3P84022 425 aaKnown RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 PLCB2Q00722 1185 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 IER5Q5VY09 327 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 NAT10Q9H0A0 1025 aaKnown RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 PUF60Q9UHX1 559 aaKnown RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 ATP2A2P16615 1042 aaKnown RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 TOB1P50616 345 aaPredicted RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 GABPAQ06546 454 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 PKN1Q16512 942 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 PHF20Q9BVI0 1012 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 CEP131Q9UPN4 1083 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 FUT2Q10981 343 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 TRIM32Q13049 653 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 FAM167AQ96KS9 214 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
VPS13B-206ENST00000496144 POLR2AP24928 1970 aaKnown RBP9.56□□□□□ -0.88
VPS13B-206ENST00000496144 COBLO75128 1261 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 MARCKSP29966 332 aaPredicted RBP9.55□□□□□ -0.88
VPS13B-206ENST00000496144 GJA9P57773 515 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 BEX3Q00994 111 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF792Q3KQV3 632 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 CMTR1Q8N1G2 835 aaKnown RBP9.55□□□□□ -0.88
VPS13B-206ENST00000496144 SPC24Q8NBT2 197 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 MAFAQ8NHW3 353 aaPredicted RBP9.55□□□□□ -0.88
VPS13B-206ENST00000496144 TOX2Q96NM4 488 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 SAMD11Q96NU1 681 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 PSME4Q14997 1843 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 DENND3A2RUS2 1198 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 LRRC26Q2I0M4 334 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 CXCL17Q6UXB2 119 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 KCNJ14Q9UNX9 436 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 DLL1O00548 723 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 CCL23P55773 120 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 IGBP1P78318 339 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 DOCK1Q14185 1865 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 PSEN2P49810 448 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 EVX2Q03828 476 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 CEP57L1Q8IYX8 460 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 APBB2Q92870 758 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
VPS13B-206ENST00000496144 FBXO2Q9UK22 296 aaPredicted RBP9.55□□□□□ -0.88
VPS13B-206ENST00000496144 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
VPS13B-206ENST00000496144 GOLGA6L19H0YKK7 550 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 HOXA2O43364 376 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 THPOP40225 353 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 MFSD10Q14728 455 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 ATP6V0A1Q93050 837 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 RANBP17Q9H2T7 1088 aaKnown RBP9.54□□□□□ -0.88
VPS13B-206ENST00000496144 MYH1P12882 1939 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 SORBS3O60504 671 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 KRT2P35908 639 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 ARHGAP4P98171 946 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 DUSP28Q4G0W2 176 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 DIS3L2Q8IYB7 885 aaKnown RBP9.54□□□□□ -0.88
VPS13B-206ENST00000496144 AFAP1L1Q8TED9 768 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 CDK5RAP3Q96JB5 506 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 PLEKHA8P1O95397 391 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 SELPP16109 830 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 CDC42EP1Q00587 391 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 TMTC3Q6ZXV5 915 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 A1CFQ9NQ94 594 aaKnown RBP9.54□□□□□ -0.88
VPS13B-206ENST00000496144 BAIAP3O94812 1187 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 GGPS1O95749 300 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 SYKP43405 635 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 NOLC1Q14978 699 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS13B-206ENST00000496144 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 MFSD5Q6N075 450 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 TRIM5Q9C035 493 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 SMARCAD1Q9H4L7 1026 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 TUBE1Q9UJT0 475 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 SYNRGQ9UMZ2 1314 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 NR3C2P08235 984 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 AOPEPQ8N6M6 819 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 ERMNQ8TAM6 284 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 CLIC6Q96NY7 704 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 DNAJC18Q9H819 358 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 PYCARDQ9ULZ3 195 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
VPS13B-206ENST00000496144 BTBD18B2RXH4 712 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 SLC34A2O95436 690 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 PTGS1P23219 599 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 TMEM266Q2M3C6 531 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 MYOCDQ8IZQ8 938 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 METTL13Q8N6R0 699 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
VPS13B-206ENST00000496144 RAB34Q9BZG1 259 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 TGFB3P10600 412 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms