RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 NOC3LQ8WTT2 800 aaKnown RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 GPRASP2Q96D09 838 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 DYDC2Q96IM9 177 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 TBC1D22BQ9NU19 505 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 RGL1Q9NZL6 768 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 IMPACTQ9P2X3 320 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.81□□□□□ -0.368e-11■■■■□ 19.7
HDLBP-245ENST00000494862 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 BICDL2A1A5D9 508 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 TRAF5O00463 557 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 MAFGO15525 162 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 DHX15O43143 795 aaKnown RBP12.8□□□□□ -0.36
HDLBP-245ENST00000494862 CHMP2AO43633 222 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 STAM2O75886 525 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 FCER1AP12319 257 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 IDEP14735 1019 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 PTGS1P23219 599 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 MSNP26038 577 aaKnown RBP12.8□□□□□ -0.36
HDLBP-245ENST00000494862 COPB2P35606 906 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 GJA5P36382 358 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 PSMC6P62333 389 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 HERVK_113P62684 666 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 CYP4A11Q02928 519 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 SPAG1Q07617 926 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 SNAPC2Q13487 334 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 P2RX5Q93086 422 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-245ENST00000494862 PURBQ96QR8 312 aaKnown RBP12.8□□□□□ -0.36
HDLBP-245ENST00000494862 SPATC1LQ9H0A9 340 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 PANK4Q9NVE7 773 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 MAPK8IP1Q9UQF2 711 aa12.8□□□□□ -0.36
HDLBP-245ENST00000494862 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 CNMDO75829 334 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 SLC25A27O95847 323 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 KRT18P05783 430 aaKnown RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 GSDMDP57764 484 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 COASYQ13057 564 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 ITGB3BPQ13352 177 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 CTTNQ14247 550 aaKnown RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 CCDC144BQ3MJ40 725 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 ARSHQ5FYA8 562 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 TTI2Q6NXR4 508 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 FOXR2Q6PJQ5 311 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 TPH2Q8IWU9 490 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 GUF1Q8N442 669 aaKnown RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 ZNF830Q96NB3 372 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 NACC1Q96RE7 527 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 CTAGE1Q96RT6 745 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 IWS1Q96ST2 819 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 RRAGCQ9HB90 399 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 SLC39A2Q9NP94 309 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 RRAGDQ9NQL2 400 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 LIMA1Q9UHB6 759 aaKnown RBP12.79□□□□□ -0.36
HDLBP-245ENST00000494862 PTPRFP10586 1907 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 PFASO15067 1338 aa12.79□□□□□ -0.36
HDLBP-245ENST00000494862 A0A1B0GTH6 734 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
HDLBP-245ENST00000494862 GIT2Q14161 759 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 NR1I3Q14994 352 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 FAM26FQ5R3K3 315 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 APTXQ7Z2E3 356 aaKnown RBP12.78□□□□□ -0.36
HDLBP-245ENST00000494862 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 RDM1Q8NG50 284 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 GTF3C2Q8WUA4 911 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-245ENST00000494862 HPS3Q969F9 1004 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 CDHR1Q96JP9 859 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 MOV10L1Q9BXT6 1211 aaKnown RBP12.78□□□□□ -0.36
HDLBP-245ENST00000494862 BHMT2Q9H2M3 363 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 KCNF1Q9H3M0 494 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-245ENST00000494862 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 A0A0G2JMZ2 1700 aa12.78□□□□□ -0.36
HDLBP-245ENST00000494862 COL11A1P12107 1806 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-245ENST00000494862 NPHP3-ACAD11A0A0J9YXS1 232 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-245ENST00000494862 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 DDX39AO00148 427 aaKnown RBP12.77□□□□□ -0.37
HDLBP-245ENST00000494862 COBLO75128 1261 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms