RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 UBIAD1Q9Y5Z9 338 aa13.38□□□□□ -0.27
VTI1A-208ENST00000494728 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
VTI1A-208ENST00000494728 TRIOO75962 3097 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 GSTTP1A0A1W2PQM5 241 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 STXBP3O00186 592 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 TLL1O43897 1013 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 LGR5O75473 907 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 GJB5O95377 273 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 TCF7P36402 384 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-208ENST00000494728 RTN1Q16799 776 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 TSGA10IPQ3SY00 556 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 XRRA1Q6P2D8 792 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 DHX32Q7L7V1 743 aaKnown RBP13.37□□□□□ -0.27
VTI1A-208ENST00000494728 DBF4BQ8NFT6 615 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 GPRASP2Q96D09 838 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 USP26Q9BXU7 913 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 TMEM260Q9NX78 707 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 THEGQ9P2T0 379 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 MTCH2Q9Y6C9 303 aa13.37□□□□□ -0.27
VTI1A-208ENST00000494728 GOLGA8AA7E2F4 631 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 RSPH10B2B2RC85 870 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 ZBTB43O43298 467 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 RSPH10BP0C881 870 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 MARK3P27448 753 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 MTMR1Q13613 665 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 PLEKHG4Q58EX7 1191 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 GDPD5Q8WTR4 605 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 KCNB2Q92953 911 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 PCYT2Q99447 389 aa13.36□□□□□ -0.27
VTI1A-208ENST00000494728 TTC3P53804 2025 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 NID2Q14112 1375 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 PARNO95453 639 aaKnown RBP13.35□□□□□ -0.27
VTI1A-208ENST00000494728 NAPAP54920 295 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 TFF2Q03403 129 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 APOBRQ0VD83 1088 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 GRB10Q13322 594 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 ITGB3BPQ13352 177 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-208ENST00000494728 NLRX1Q86UT6 975 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 RIC8AQ9NPQ8 531 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 JADE2Q9NQC1 790 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
VTI1A-208ENST00000494728 MTUS1Q9ULD2 1270 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 SNX14Q9Y5W7 946 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 EMSYQ7Z589 1322 aa13.35□□□□□ -0.27
VTI1A-208ENST00000494728 ABHD14A-ACY1A0A1B0GW23 586 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 LINC01553A4QN01 128 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 POU3F3P20264 500 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-208ENST00000494728 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
VTI1A-208ENST00000494728 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
VTI1A-208ENST00000494728 MARCH8Q5T0T0 291 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 PPP1R18Q6NYC8 613 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
VTI1A-208ENST00000494728 ANO3Q9BYT9 981 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 KCNH7Q9NS40 1196 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
VTI1A-208ENST00000494728 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-208ENST00000494728 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-208ENST00000494728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-208ENST00000494728 CHRNA1P02708 482 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 ARP10275 920 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 HSPA4P34932 840 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 ADCY7P51828 1080 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 MGAT3Q09327 533 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 IKBKEQ14164 716 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 Q6ZUG5 572 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 MYOCDQ8IZQ8 938 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 BRF1Q92994 677 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 NECAB3Q96P71 396 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-208ENST00000494728 MXRA8Q9BRK3 442 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-208ENST00000494728 NRCAMQ92823 1304 aa13.33□□□□□ -0.28
VTI1A-208ENST00000494728 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 SREBF1P36956 1147 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 KCNQ1P51787 676 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 HTRA4P83105 476 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-208ENST00000494728 KRT32Q14532 448 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 GRIK4Q16099 956 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 PKN1Q16512 942 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 FAM26DQ5JW98 314 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 SYNE3Q6ZMZ3 975 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 GIMAP8Q8ND71 665 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-208ENST00000494728 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
VTI1A-208ENST00000494728 CRYGNQ8WXF5 182 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 CCDC136Q96JN2 1154 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 CDHR1Q96JP9 859 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms