RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 CIITAP33076 1130 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 SETQ01105 290 aaPredicted RBP18.37■□□□□ 0.53
SATB1-217ENST00000493952 HIC1Q14526 733 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 RABEP1Q15276 862 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 SHHQ15465 462 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 TMEM199Q8N511 208 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 SEPT1Q8WYJ6 367 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 UIMC1Q96RL1 719 aa18.37■□□□□ 0.53
SATB1-217ENST00000493952 DDX39AO00148 427 aaKnown RBP18.36■□□□□ 0.53
SATB1-217ENST00000493952 SOX1O00570 391 aaPredicted RBP18.36■□□□□ 0.53
SATB1-217ENST00000493952 USP11P51784 963 aa18.36■□□□□ 0.53
SATB1-217ENST00000493952 CCL23P55773 120 aa18.36■□□□□ 0.53
SATB1-217ENST00000493952 PPIGQ13427 754 aaKnown RBP eCLIP18.36■□□□□ 0.53
SATB1-217ENST00000493952 PRR16Q569H4 304 aa18.36■□□□□ 0.53
SATB1-217ENST00000493952 LENG9Q96B70 501 aa18.36■□□□□ 0.53
SATB1-217ENST00000493952 SCLYQ96I15 445 aa18.36■□□□□ 0.53
SATB1-217ENST00000493952 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
SATB1-217ENST00000493952 ZNF215Q9UL58 517 aaPredicted RBP18.36■□□□□ 0.53
SATB1-217ENST00000493952 EMSYQ7Z589 1322 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 IPO5O00410 1097 aaKnown RBP18.35■□□□□ 0.53
SATB1-217ENST00000493952 DHX15O43143 795 aaKnown RBP18.35■□□□□ 0.53
SATB1-217ENST00000493952 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 ACTR2P61160 394 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
SATB1-217ENST00000493952 C16orf59Q7L2K0 433 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 OXER1Q8TDS5 423 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 DHX38Q92620 1227 aaKnown RBP18.35■□□□□ 0.53
SATB1-217ENST00000493952 ZSCAN31Q96LW9 406 aaPredicted RBP18.35■□□□□ 0.53
SATB1-217ENST00000493952 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
SATB1-217ENST00000493952 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 LGR5O75473 907 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 CCNE2O96020 404 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 ACRP10323 421 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 HOXC8P31273 242 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 FOSBP53539 338 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 NONOQ15233 471 aaKnown RBP eCLIP18.34■□□□□ 0.53
SATB1-217ENST00000493952 INF2Q27J81 1249 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 KRT25Q7Z3Z0 450 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 PCYT2Q99447 389 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.53
SATB1-217ENST00000493952 RNPEPQ9H4A4 650 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
SATB1-217ENST00000493952 SH2B1Q9NRF2 756 aaPredicted RBP18.34■□□□□ 0.53
SATB1-217ENST00000493952 C17orf102A2RUQ5 167 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 TDP2O95551 362 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 BFSP2Q13515 415 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 GLG1Q92896 1179 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 WNT8BQ93098 351 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 LRCH3Q96II8 777 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 LLPHQ9BRT6 129 aaKnown RBP18.33■□□□□ 0.52
SATB1-217ENST00000493952 BACH2Q9BYV9 841 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 SMARCAD1Q9H4L7 1026 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 ERAP1Q9NZ08 941 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 MICAL3Q7RTP6 2002 aa18.33■□□□□ 0.52
SATB1-217ENST00000493952 CYP3A7-CYP3A51PA0A087WV96 503 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 CCDC194A0A1B0GVG4 234 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 ST18O60284 1047 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 ATG7O95352 703 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 CD2BP2O95400 341 aaKnown RBP18.32■□□□□ 0.52
SATB1-217ENST00000493952 CYP3A7P24462 503 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 MARK3P27448 753 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 KRT2P35908 639 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 PTK7Q13308 1070 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 EARS2Q5JPH6 523 aaKnown RBP18.32■□□□□ 0.52
SATB1-217ENST00000493952 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 CAGE1Q8TC20 777 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 LMBR1Q8WVP7 490 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 VWCEQ96DN2 955 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 TBC1D22BQ9NU19 505 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 SZT2Q5T011 3432 aa18.32■□□□□ 0.52
SATB1-217ENST00000493952 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 MSH4O15457 936 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 TREHO43280 583 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 MMP1P03956 469 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 IQCF3P0C7M6 154 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 RBL2Q08999 1139 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 NR5A1Q13285 461 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 TRIM71Q2Q1W2 868 aaKnown RBP18.31■□□□□ 0.52
SATB1-217ENST00000493952 Q4G0T1 1027 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 KRT40Q6A162 431 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 PSRC1Q6PGN9 363 aaPredicted RBP18.31■□□□□ 0.52
SATB1-217ENST00000493952 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 ABHD15Q6UXT9 468 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 PIK3AP1Q6ZUJ8 805 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 ZNF365Q70YC5 407 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 SERINC5Q86VE9 423 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 AFAP1L1Q8TED9 768 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 TNFRSF25Q93038 417 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 ATP6V0A1Q93050 837 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 RNPC3Q96LT9 517 aaKnown RBP18.31■□□□□ 0.52
SATB1-217ENST00000493952 MBOAT7Q96N66 472 aa18.31■□□□□ 0.52
SATB1-217ENST00000493952 ARID2Q68CP9 1835 aa18.3■□□□□ 0.52
SATB1-217ENST00000493952 IGKV6D-21A0A0A0MT36 114 aa18.3■□□□□ 0.52
SATB1-217ENST00000493952 CKBP12277 381 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms