RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 GCOM1H8Y6P7 765 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 KPNA6O60684 536 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 NBNO60934 754 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 F2P00734 622 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 SUPT20HL2P0C7V6 817 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 POLR2MP0CAP2 368 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 MFSD10Q14728 455 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 CCDC85BQ15834 202 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 KIAA0753Q2KHM9 967 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 CELF3Q5SZQ8 465 aaKnown RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 KRT40Q6A162 431 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 LRSAM1Q6UWE0 723 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 SESTD1Q86VW0 696 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 DHX37Q8IY37 1157 aaKnown RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 EMID1Q96A84 441 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 C16orf70Q9BSU1 422 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 SEZ6LQ9BYH1 1024 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 CERS4Q9HA82 394 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 SPTLC3Q9NUV7 552 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 RTEL1Q9NZ71 1219 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 SLC4A7Q9Y6M7 1214 aa9.33□□□□□ -0.92
HDAC6-234ENST00000493923 TCF20Q9UGU0 1960 aaKnown RBP9.33□□□□□ -0.92
HDAC6-234ENST00000493923 XIRP2A4UGR9 3374 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 LCHNA4D1U4 455 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 B4DLN1 442 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 MEIS2O14770 477 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 ATP2A2P16615 1042 aaKnown RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 CASTP20810 708 aaKnown RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 MRPL12P52815 198 aaKnown RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 DEFB103AP81534 67 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 LAMC2Q13753 1193 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 DGKDQ16760 1214 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 UBE2SQ16763 222 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 BRDTQ58F21 947 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 CATIPQ7Z7H3 387 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 PPTC7Q8NI37 304 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 SPATA33Q96N06 139 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 MPHOSPH6Q99547 160 aaKnown RBP9.32□□□□□ -0.92
HDAC6-234ENST00000493923 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 MAF1Q9H063 256 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 MSRAQ9UJ68 235 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
HDAC6-234ENST00000493923 MICAL3Q7RTP6 2002 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 ERICH2A1L162 156 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 TULP2O00295 520 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 ATP9AO75110 1047 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 DDAH1O94760 285 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 BAG4O95429 457 aaKnown RBP9.31□□□□□ -0.92
HDAC6-234ENST00000493923 CA3P07451 260 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 CKBP12277 381 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 CPA1P15085 419 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 CCND2P30279 289 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-234ENST00000493923 RBL2Q08999 1139 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 RAB30Q15771 203 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 ZNF618Q5T7W0 954 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 TYW1BQ6NUM6 668 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 CYFIP1Q7L576 1253 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 CCDC82Q8N4S0 544 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 INPP4AQ96PE3 977 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-234ENST00000493923 FTOQ9C0B1 505 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC6-234ENST00000493923 ANO2Q9NQ90 1003 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 NOD1Q9Y239 953 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 PCDHA11Q9Y5I1 949 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 COL4A4P53420 1690 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-234ENST00000493923 KAT6AQ92794 2004 aa9.31□□□□□ -0.92
HDAC6-234ENST00000493923 TTLL13PA6NNM8 815 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 SPATA31C2B4DYI2 1134 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 TREHO43280 583 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 CXCL10P02778 98 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 LGALS2P05162 132 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 SELPP16109 830 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 IGFBP4P22692 258 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 HOXC8P31273 242 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 ICAM3P32942 547 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 WDR5P61964 334 aaKnown RBP9.3□□□□□ -0.92
HDAC6-234ENST00000493923 EXOSC10Q01780 885 aaKnown RBP9.3□□□□□ -0.92
HDAC6-234ENST00000493923 SP4Q02446 784 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 TAP1Q03518 808 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 FUT2Q10981 343 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 BFSP2Q13515 415 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 SART3Q15020 963 aaKnown RBP9.3□□□□□ -0.92
HDAC6-234ENST00000493923 PPP2R2DQ66LE6 453 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 NFXL1Q6ZNB6 911 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 TMTC3Q6ZXV5 915 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 LRRC8DQ7L1W4 858 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 HERC6Q8IVU3 1022 aa9.3□□□□□ -0.92
HDAC6-234ENST00000493923 C7orf31Q8N865 590 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms