RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	RRP1	P56182	461 aa	Known RBP	22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ARHGAP4	P98171	946 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	SIGLEC14	Q08ET2	396 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	COASY	Q13057	564 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CAMK1	Q14012	370 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	NEDD9	Q14511	834 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CBX2	Q14781	532 aa	Predicted RBP	22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	EFHB	Q8N7U6	833 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	SMRP1	Q8NCR6	262 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZNF215	Q9UL58	517 aa	Predicted RBP	22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	PCDHA1	Q9Y5I3	950 aa		22.35	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	HOXA13	P31271	388 aa	Predicted RBP	22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ADAM17	P78536	824 aa		22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	TRAF1	Q13077	416 aa		22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	GNPTAB	Q3T906	1256 aa		22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ATOH1	Q92858	354 aa	Predicted RBP	22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	EHMT1	Q9H9B1	1298 aa		22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	RC3H2	Q9HBD1	1191 aa	Known RBP	22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	CLEC1B	Q9P126	229 aa		22.34	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	NRCAM	Q92823	1304 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	SPTBN4	Q9H254	2564 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	KDM4A	O75164	1064 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	DGKI	O75912	1065 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	GHR	P10912	638 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	MFAP1	P55081	439 aa	Known RBP	22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	METTL7B	Q6UX53	244 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	RSPH3	Q86UC2	560 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZNF589	Q86UQ0	364 aa	Predicted RBP	22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	IL31RA	Q8NI17	732 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	ZFP91	Q96JP5	570 aa	Predicted RBP	22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	PHF7	Q9BWX1	381 aa	Predicted RBP	22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	BCAS3	Q9H6U6	928 aa		22.33	■■□□□ 1.17
CDK5RAP2-218	ENST00000491334	NEDD4	P46934	1319 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	GCOM1	H8Y6P7	765 aa	Predicted RBP	22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	POLR2M	P0CAP2	368 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	AVPR2	P30518	371 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	TAF2	Q6P1X5	1199 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	CYFIP1	Q7L576	1253 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	SPPL3	Q8TCT6	385 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	GPR20	Q99678	358 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	FAM86C1	Q9NVL1	165 aa		22.32	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	SALL3	Q9BXA9	1300 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ZBTB5	O15062	677 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	STAM2	O75886	525 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ITGB1	P05556	798 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ICAM3	P32942	547 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	NMI	Q13287	307 aa	Predicted RBP	22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	LPIN1	Q14693	890 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	UTP14C	Q5TAP6	766 aa	Known RBP	22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	FCHSD1	Q86WN1	690 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ENAH	Q8N8S7	591 aa	Predicted RBP	22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	LMBR1	Q8WVP7	490 aa		22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	USP15	Q9Y4E8	981 aa	Predicted RBP	22.31	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	SPATA31C2	B4DYI2	1134 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	KLRF2	D3W0D1	207 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	DNAJB1	P25685	340 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	NRIP1	P48552	1158 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	NUBP1	P53384	320 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ADGRD2	Q7Z7M1	963 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	CMTR2	Q8IYT2	770 aa	Known RBP	22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	MTMR8	Q96EF0	704 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	RPGRIP1	Q96KN7	1286 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ZSWIM5	Q9P217	1185 aa		22.3	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	RIF1	Q5UIP0	2472 aa	Known RBP	22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	PPP1R11	O60927	126 aa	Predicted RBP	22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ANKRD45	Q5TZF3	282 aa		22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	RBM23	Q86U06	439 aa	Known RBP	22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	STAG2	Q8N3U4	1231 aa		22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	KLHL23	Q8NBE8	558 aa		22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	POF1B	Q8WVV4	589 aa		22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	PCDHB15	Q9Y5E8	787 aa		22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	MRPL42	Q9Y6G3	142 aa	Known RBP	22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	MYH6	P13533	1939 aa		22.29	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	TTC3	P53804	2025 aa		22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334		B4E1Z4	1266 aa		22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ATF7	P17544	494 aa	Predicted RBP	22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	PDE1A	P54750	535 aa		22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	VCP	P55072	806 aa	Known RBP	22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	TRIM50	Q86XT4	487 aa		22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ASIC4	Q96FT7	647 aa		22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	INPP4A	Q96PE3	977 aa	Predicted RBP	22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	TLE6	Q9H808	572 aa		22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	BARX2	Q9UMQ3	279 aa	Predicted RBP	22.28	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	FIBP	O43427	364 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	STAG3L1	P0CL83	205 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	MGAT3	Q09327	533 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	FBXO47	Q5MNV8	452 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	RUFY4	Q6ZNE9	571 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	TSHZ1	Q6ZSZ6	1077 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	MICAL1	Q8TDZ2	1067 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	UBAC1	Q9BSL1	405 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	FTHL17	Q9BXU8	183 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	RTEL1	Q9NZ71	1219 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	SUPT16H	Q9Y5B9	1047 aa	Known RBP	22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	ATG2A	Q2TAZ0	1938 aa		22.27	■■□□□ 1.16
CDK5RAP2-218	ENST00000491334	FSD2	A1L4K1	749 aa		22.26	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	MRPS9	P82933	396 aa	Known RBP	22.26	■■□□□ 1.15
CDK5RAP2-218	ENST00000491334	IFIT1B	Q5T764	474 aa	Known RBP	22.26	■■□□□ 1.15

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms