RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 OSBPL7Q9BZF2 842 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 TSPYL2Q9H2G4 693 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-220ENST00000491319 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 WDR81Q562E7 1941 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 TCF7P36402 384 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-220ENST00000491319 PLEKHG4Q58EX7 1191 aa18.04■□□□□ 0.48
SMPD4-220ENST00000491319 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
SMPD4-220ENST00000491319 NEK1Q96PY6 1258 aa18.04■□□□□ 0.48
SMPD4-220ENST00000491319 RAD9AQ99638 391 aa18.04■□□□□ 0.48
SMPD4-220ENST00000491319 PKD2L1Q9P0L9 805 aa18.04■□□□□ 0.48
SMPD4-220ENST00000491319 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 SPDYE3A6NKU9 549 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 TNFRSF10AO00220 468 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 CAND2O75155 1236 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 ADAM17P78536 824 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 ARHGAP4P98171 946 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 ADCK5Q3MIX3 580 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 WWC2Q6AWC2 1192 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 RASEFQ8IZ41 740 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 MYOCDQ8IZQ8 938 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 GIMAP8Q8ND71 665 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-220ENST00000491319 PCDHA6Q9UN73 950 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 PCDHA8Q9Y5H6 950 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 UBIAD1Q9Y5Z9 338 aa18.03■□□□□ 0.48
SMPD4-220ENST00000491319 MYH9P35579 1960 aaKnown RBP18.02■□□□□ 0.48
SMPD4-220ENST00000491319 GNAT1P11488 350 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 KCNQ1P51787 676 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 MTMR1Q13613 665 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 TYW1BQ6NUM6 668 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 SYNE3Q6ZMZ3 975 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 CDHR1Q96JP9 859 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
SMPD4-220ENST00000491319 EVPLQ92817 2033 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 KIAA1671Q9BY89 1806 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 GSTTP1A0A1W2PQM5 241 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 AMHP03971 560 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 MARK3P27448 753 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 ERVK-21P61565 698 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 EXOSC10Q01780 885 aaKnown RBP18.01■□□□□ 0.47
SMPD4-220ENST00000491319 RTN1Q16799 776 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 SEPT8Q92599 483 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 PGBD1Q96JS3 809 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 TGS1Q96RS0 853 aaKnown RBP18.01■□□□□ 0.47
SMPD4-220ENST00000491319 UHRF1Q96T88 793 aaPredicted RBP18.01■□□□□ 0.47
SMPD4-220ENST00000491319 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
SMPD4-220ENST00000491319 COL4A6Q14031 1691 aa18.01■□□□□ 0.47
SMPD4-220ENST00000491319 NRCAMQ92823 1304 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 TTC3P53804 2025 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 ZBTB43O43298 467 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 CDC45O75419 566 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 NAPAP54920 295 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 FUT2Q10981 343 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 RUFY4Q6ZNE9 571 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 DHX32Q7L7V1 743 aaKnown RBP18■□□□□ 0.47
SMPD4-220ENST00000491319 SEPT1Q8WYJ6 367 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 NECAB3Q96P71 396 aaPredicted RBP18■□□□□ 0.47
SMPD4-220ENST00000491319 JADE2Q9NQC1 790 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 INSL6Q9Y581 213 aa18■□□□□ 0.47
SMPD4-220ENST00000491319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-220ENST00000491319 GOLGA8AA7E2F4 631 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 GOLGA8BA8MQT2 603 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 BMP1P13497 986 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 HTRA4P83105 476 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-220ENST00000491319 PPFIA1Q13136 1202 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 GRIK4Q16099 956 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 TSGA10IPQ3SY00 556 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 FAM26DQ5JW98 314 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 GLG1Q92896 1179 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 C17orf80Q9BSJ5 609 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 EHMT1Q9H9B1 1298 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 RIC8AQ9NPQ8 531 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 ERAP1Q9NZ08 941 aa17.99■□□□□ 0.47
SMPD4-220ENST00000491319 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 STXBP3O00186 592 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 CHRNA1P02708 482 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 CDC27P30260 824 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 AAK1Q2M2I8 961 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 PPP1R18Q6NYC8 613 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 CYP2W1Q8TAV3 490 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-220ENST00000491319 MXRA8Q9BRK3 442 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 IFIH1Q9BYX4 1025 aaKnown RBP17.98■□□□□ 0.47
SMPD4-220ENST00000491319 JPH1Q9HDC5 661 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-220ENST00000491319 KCNH7Q9NS40 1196 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-220ENST00000491319 TUBE1Q9UJT0 475 aa17.98■□□□□ 0.47
SMPD4-220ENST00000491319 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-220ENST00000491319 UPP2O95045 317 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 GHRP10912 638 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 CPA1P15085 419 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 ADCY7P51828 1080 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 KRT32Q14532 448 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 TAF2Q6P1X5 1199 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 FBXO22Q8NEZ5 403 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 APBB2Q92870 758 aa17.97■□□□□ 0.47
SMPD4-220ENST00000491319 TOP1MTQ969P6 601 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms