RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 APOBRQ0VD83 1088 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 RESTQ13127 1097 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 PWP2Q15269 919 aaKnown RBP9.88□□□□□ -0.83
HPS4-215ENST00000491142 SYDE2Q5VT97 1194 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 CNKSR3Q6P9H4 555 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 RNF207Q6ZRF8 634 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 LRRC8DQ7L1W4 858 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 CAGE1Q8TC20 777 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 SCFD2Q8WU76 684 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 BBXQ8WY36 941 aaPredicted RBP9.88□□□□□ -0.83
HPS4-215ENST00000491142 FBXL18Q96ME1 805 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 C17orf80Q9BSJ5 609 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 SCAND2PQ9GZW5 306 aaPredicted RBP9.88□□□□□ -0.83
HPS4-215ENST00000491142 NAPBQ9H115 298 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 GDPD2Q9HCC8 539 aa9.88□□□□□ -0.83
HPS4-215ENST00000491142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-215ENST00000491142 TRIP12Q14669 1992 aaPredicted RBP9.88□□□□□ -0.83
HPS4-215ENST00000491142 USP34Q70CQ2 3546 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 FRMPD2Q68DX3 1309 aaPredicted RBP9.87□□□□□ -0.83
HPS4-215ENST00000491142 ABHD14A-ACY1A0A1B0GW23 586 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 POTEB3A0JP26 581 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 SYCE3A1L190 88 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 H3BQ06 376 aaPredicted RBP9.87□□□□□ -0.83
HPS4-215ENST00000491142 FIBPO43427 364 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 PRC1O43663 620 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 JAK2O60674 1132 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 CTDNEP1O95476 244 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 CKBP12277 381 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 NOVP48745 357 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 RPS6P62753 249 aaKnown RBP9.87□□□□□ -0.83
HPS4-215ENST00000491142 POTEBQ6S5H4 581 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 BTNL9Q6UXG8 535 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
HPS4-215ENST00000491142 SESTD1Q86VW0 696 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 DCAF4Q8WV16 495 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 ANKS1AQ92625 1134 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 KAT2BQ92831 832 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 LRRC2Q9BYS8 371 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 MYH6P13533 1939 aa9.87□□□□□ -0.83
HPS4-215ENST00000491142 DCXO43602 365 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 RANBP6O60518 1105 aaKnown RBP9.86□□□□□ -0.83
HPS4-215ENST00000491142 MMP3P08254 477 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 ANTXR2P58335 489 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 RBL2Q08999 1139 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 IKBKEQ14164 716 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 LY6KQ17RY6 165 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 FOXD4L6Q3SYB3 417 aaPredicted RBP9.86□□□□□ -0.83
HPS4-215ENST00000491142 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 ATL3Q6DD88 541 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 CCDC62Q6P9F0 684 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 FOXD4L3Q6VB84 417 aaPredicted RBP9.86□□□□□ -0.83
HPS4-215ENST00000491142 CHST3Q7LGC8 479 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 RALYLQ86SE5 291 aaKnown RBP9.86□□□□□ -0.83
HPS4-215ENST00000491142 FAM184AQ8NB25 1140 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 DNERQ8NFT8 737 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 NEK9Q8TD19 979 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 WNT8BQ93098 351 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 TSPY26PQ9H489 355 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 HDAC6Q9UBN7 1215 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 GTF2IRD1Q9UHL9 959 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 NID2Q14112 1375 aa9.86□□□□□ -0.83
HPS4-215ENST00000491142 DHX16O60231 1041 aaKnown RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 PARNO95453 639 aaKnown RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 HAND2P61296 217 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 ZNF200P98182 395 aaPredicted RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 ARHGAP1Q07960 439 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 TRDNQ13061 729 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 TRIM71Q2Q1W2 868 aaKnown RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 ZNF618Q5T7W0 954 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 SEPT14Q6ZU15 432 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 TBC1D5Q92609 795 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 ANP32BQ92688 251 aaKnown RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 MRPL38Q96DV4 380 aaKnown RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 TMEM87BQ96K49 555 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 MPHOSPH6Q99547 160 aaKnown RBP9.85□□□□□ -0.83
HPS4-215ENST00000491142 TMEM47Q9BQJ4 181 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 MTA3Q9BTC8 594 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 INSL6Q9Y581 213 aa9.85□□□□□ -0.83
HPS4-215ENST00000491142 H3BQV1 296 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 SH2B2O14492 632 aaPredicted RBP9.84□□□□□ -0.83
HPS4-215ENST00000491142 EFCAB14O75071 495 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 GH1P01241 217 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 HTRA4P83105 476 aaPredicted RBP9.84□□□□□ -0.83
HPS4-215ENST00000491142 ZP2Q05996 745 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 HIC1Q14526 733 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 UVSSAQ2YD98 709 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 PUS10Q3MIT2 529 aaKnown RBP9.84□□□□□ -0.83
HPS4-215ENST00000491142 EPC2Q52LR7 807 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 TCEAL5Q5H9L2 206 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 EP400NLQ6ZTU2 488 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 HFE2Q6ZVN8 426 aa9.84□□□□□ -0.83
HPS4-215ENST00000491142 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms