RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 NFIAQ12857 509 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 PPP2R5AQ15172 486 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 SEL1L2Q5TEA6 688 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 ARHGAP27Q6ZUM4 889 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 RASGRP2Q7LDG7 609 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 FRMD5Q7Z6J6 570 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 SFR1Q86XK3 245 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 SULF1Q8IWU6 871 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 TSC1Q92574 1164 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 TNFRSF25Q93038 417 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 EIF3CQ99613 913 aaKnown RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 NRBP2Q9NSY0 501 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 TTC26A0AVF1 554 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 SLC16A3O15427 465 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 P4HBP07237 508 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 PSAPP07602 524 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 H2AFZP0C0S5 128 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 MYZAPP0CAP1 466 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 KIF11P52732 1056 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 KRT76Q01546 638 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 E2F4Q16254 413 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 EDRF1Q3B7T1 1238 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 CEP55Q53EZ4 464 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 FAM160B1Q5W0V3 765 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 H2AFVQ71UI9 128 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 MSANTD4Q8NCY6 345 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 POLR3CQ9BUI4 534 aaPredicted RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 CALCOCO1Q9P1Z2 691 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 NOP56O00567 594 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 SPDYE6P0CI01 402 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 GRB10Q13322 594 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 Q4G0T1 1027 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 PEX26Q7Z412 305 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 ANKRD35Q8N283 1001 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 HOXC10Q9NYD6 342 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 MAP3K20Q9NYL2 800 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 NWD2Q9ULI1 1742 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 UBE4BO95155 1302 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 CYTH3O43739 400 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 RPA1P27694 616 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 NCBP1Q09161 790 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 MTMR1Q13613 665 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 GRIK5Q16478 980 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 LIN9Q5TKA1 542 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 FKBP1CQ5VVH2 108 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 DEPTORQ8TB45 409 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 SMCR8Q8TEV9 937 aaPredicted RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 EEF2KMTQ96G04 330 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 DYDC2Q96IM9 177 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 CALR3Q96L12 384 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 ODF2LQ9ULJ1 636 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 CEP83Q9Y592 693 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 POTEFA5A3E0 1075 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 NR3C1P04150 777 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 POTEIP0CG38 1075 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 CD44P16070 742 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 TGFB2P61812 414 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 STK4Q13043 487 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 BIRC3Q13489 604 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 POTEGQ6S5H5 508 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 POTEEQ6S8J3 1075 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 U2AF1L4Q8WU68 220 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 DDX4Q9NQI0 724 aaKnown RBP8.04□□□□□ -1.12
NPHP3-208ENST00000490993 AMFRQ9UKV5 643 aa8.04□□□□□ -1.12
NPHP3-208ENST00000490993 NUP98P52948 1817 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 TJP1Q07157 1748 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 PRPF6O94906 941 aaKnown RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 KRT5P13647 590 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 EZH2Q15910 746 aaKnown RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 MAATS1Q7Z4T9 603 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 PSMD1Q99460 953 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 FAM107BQ9H098 131 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 FBXO40Q9UH90 709 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 ITGB4P16144 1822 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 A6NNZ2 444 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 SLC37A4O43826 429 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 KIAA0754O94854 1291 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 DPEP1P16444 411 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 SREBF1P36956 1147 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 PAK2Q13177 524 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 TUBB8Q3ZCM7 444 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 ATF5Q9Y2D1 282 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 DDTLA6NHG4 134 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 IPO5O00410 1097 aaKnown RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 ANXA13P27216 316 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 STAT3P40763 770 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 MFAP3P55082 362 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 RASSF7Q02833 373 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 INTS8Q75QN2 995 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms