RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SEPT1Q8WYJ6 367 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 UPF3BQ9BZI7 483 aaKnown RBP35.83■■■■□ 3.33
LDB1-204ENST00000490751 NCOA5Q9HCD5 579 aaKnown RBP35.83■■■■□ 3.33
LDB1-204ENST00000490751 SETD4Q9NVD3 440 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 BAIAP3O94812 1187 aa35.82■■■■□ 3.32
LDB1-204ENST00000490751 CXCL10P02778 98 aa35.82■■■■□ 3.32
LDB1-204ENST00000490751 CCDC12Q8WUD4 166 aaPredicted RBP35.82■■■■□ 3.32
LDB1-204ENST00000490751 SLC9A7Q96T83 725 aa35.82■■■■□ 3.32
LDB1-204ENST00000490751 RNF26Q9BY78 433 aaPredicted RBP35.82■■■■□ 3.32
LDB1-204ENST00000490751 ZMYND12Q9H0C1 365 aa35.82■■■■□ 3.32
LDB1-204ENST00000490751 PCDHA11Q9Y5I1 949 aa35.82■■■■□ 3.32
LDB1-204ENST00000490751 CENPBP07199 599 aaPredicted RBP35.81■■■■□ 3.32
LDB1-204ENST00000490751 IFNAR1P17181 557 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 THPOP40225 353 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 CEP55Q53EZ4 464 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 SLC26A6Q9BXS9 759 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 SLC28A3Q9HAS3 691 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 C6orf50Q9HD87 102 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 JPH1Q9HDC5 661 aaPredicted RBP35.81■■■■□ 3.32
LDB1-204ENST00000490751 KAT6AQ92794 2004 aa35.81■■■■□ 3.32
LDB1-204ENST00000490751 ARP10275 920 aa35.8■■■■□ 3.32
LDB1-204ENST00000490751 GNAT1P11488 350 aa35.8■■■■□ 3.32
LDB1-204ENST00000490751 MYOGP15173 224 aa35.8■■■■□ 3.32
LDB1-204ENST00000490751 CNKSR3Q6P9H4 555 aa35.8■■■■□ 3.32
LDB1-204ENST00000490751 MAFAQ8NHW3 353 aaPredicted RBP35.8■■■■□ 3.32
LDB1-204ENST00000490751 PTPRSQ13332 1948 aa35.8■■■■□ 3.32
LDB1-204ENST00000490751 ARHGAP4P98171 946 aa35.79■■■■□ 3.32
LDB1-204ENST00000490751 MBTPS1Q14703 1052 aa35.79■■■■□ 3.32
LDB1-204ENST00000490751 PHOSPHO2Q8TCD6 241 aa35.79■■■■□ 3.32
LDB1-204ENST00000490751 ADAMTS3O15072 1205 aa35.78■■■■□ 3.32
LDB1-204ENST00000490751 ZNF76P36508 570 aa35.78■■■■□ 3.32
LDB1-204ENST00000490751 LMBR1Q8WVP7 490 aa35.78■■■■□ 3.32
LDB1-204ENST00000490751 SDF4Q9BRK5 362 aa35.78■■■■□ 3.32
LDB1-204ENST00000490751 SLC9A2Q9UBY0 812 aa35.78■■■■□ 3.32
LDB1-204ENST00000490751 NFASCO94856 1347 aa35.78■■■■□ 3.32
LDB1-204ENST00000490751 RSPH10B2B2RC85 870 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 MEIS1O00470 390 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 RSPH10BP0C881 870 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 KCNJ6P48051 423 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 REXO1Q8N1G1 1221 aaKnown RBP35.77■■■■□ 3.32
LDB1-204ENST00000490751 GLG1Q92896 1179 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 LARP6Q9BRS8 491 aaKnown RBP35.77■■■■□ 3.32
LDB1-204ENST00000490751 PRDM12Q9H4Q4 367 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 AGO4Q9HCK5 861 aaKnown RBP35.77■■■■□ 3.32
LDB1-204ENST00000490751 ERAP1Q9NZ08 941 aa35.77■■■■□ 3.32
LDB1-204ENST00000490751 RBAK-RBAKDNI3L0D1 243 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 MARK3P27448 753 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 GNA11P29992 359 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 ADAM17P78536 824 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 TCTN1Q2MV58 587 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 PPP2R2DQ66LE6 453 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 SMARCAD1Q9H4L7 1026 aa35.76■■■■□ 3.32
LDB1-204ENST00000490751 EMSYQ7Z589 1322 aa35.76■■■■□ 3.31
LDB1-204ENST00000490751 NRCAMQ92823 1304 aa35.76■■■■□ 3.31
LDB1-204ENST00000490751 WDR5P61964 334 aaKnown RBP35.75■■■■□ 3.31
LDB1-204ENST00000490751 ITGB3BPQ13352 177 aaPredicted RBP35.75■■■■□ 3.31
LDB1-204ENST00000490751 MCTP2Q6DN12 878 aa35.75■■■■□ 3.31
LDB1-204ENST00000490751 HERC6Q8IVU3 1022 aa35.75■■■■□ 3.31
LDB1-204ENST00000490751 CCDC148Q8NFR7 591 aa35.75■■■■□ 3.31
LDB1-204ENST00000490751 ZNF274Q96GC6 653 aaPredicted RBP35.75■■■■□ 3.31
LDB1-204ENST00000490751 PDRG1Q9NUG6 133 aa35.75■■■■□ 3.31
LDB1-204ENST00000490751 CHD9Q3L8U1 2897 aa35.74■■■■□ 3.31
LDB1-204ENST00000490751 MYO9BQ13459 2157 aa35.74■■■■□ 3.31
LDB1-204ENST00000490751 NIPA1Q7RTP0 329 aa35.74■■■■□ 3.31
LDB1-204ENST00000490751 CRYGNQ8WXF5 182 aa35.74■■■■□ 3.31
LDB1-204ENST00000490751 GAS2L1Q99501 681 aaPredicted RBP35.74■■■■□ 3.31
LDB1-204ENST00000490751 VPS54Q9P1Q0 977 aa35.74■■■■□ 3.31
LDB1-204ENST00000490751 FAM86B1E9PN63 330 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 CAND2O75155 1236 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 LGR5O75473 907 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 CTSHP09668 335 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 FAM86B2P0C5J1 330 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 PPFIA1Q13136 1202 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 PLA2G4DQ86XP0 818 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 PCYT2Q99447 389 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 EYSQ5T1H1 3165 aa35.73■■■■□ 3.31
LDB1-204ENST00000490751 ABHD14A-ACY1A0A1B0GW23 586 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 CA3P07451 260 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 CYP3A4P08684 503 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 ACTR2P61160 394 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 TRIM22Q8IYM9 498 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 BICD2Q8TD16 824 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 RASGRP4Q8TDF6 673 aa35.72■■■■□ 3.31
LDB1-204ENST00000490751 CPLX1O14810 134 aa35.71■■■■□ 3.31
LDB1-204ENST00000490751 DEFB103AP81534 67 aa35.71■■■■□ 3.31
LDB1-204ENST00000490751 SSRP1Q08945 709 aaKnown RBP35.71■■■■□ 3.31
LDB1-204ENST00000490751 STK3Q13188 491 aa35.71■■■■□ 3.31
LDB1-204ENST00000490751 IKBKEQ14164 716 aa35.71■■■■□ 3.31
LDB1-204ENST00000490751 GRIK4Q16099 956 aa35.71■■■■□ 3.31
LDB1-204ENST00000490751 AZI2Q9H6S1 392 aa35.71■■■■□ 3.31
LDB1-204ENST00000490751 IGLV3-22A0A075B6J6 115 aa35.7■■■■□ 3.31
LDB1-204ENST00000490751 KIF28PB7ZC32 967 aa35.7■■■■□ 3.31
LDB1-204ENST00000490751 DBF4BQ8NFT6 615 aa35.7■■■■□ 3.31
LDB1-204ENST00000490751 DDX39AO00148 427 aaKnown RBP35.69■■■■□ 3.3
LDB1-204ENST00000490751 EFCAB14O75071 495 aa35.69■■■■□ 3.3
LDB1-204ENST00000490751 TMCO2Q7Z6W1 182 aaPredicted RBP35.69■■■■□ 3.3
LDB1-204ENST00000490751 SH3GLB2Q9NR46 395 aa35.69■■■■□ 3.3
LDB1-204ENST00000490751 MICAL3Q7RTP6 2002 aa35.69■■■■□ 3.3
LDB1-204ENST00000490751 RUFY4Q6ZNE9 571 aa35.68■■■■□ 3.3
LDB1-204ENST00000490751 PHF6Q8IWS0 365 aaKnown RBP eCLIP35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms