RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TREHO43280 583 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 CHGBP05060 677 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 ICAM1P05362 532 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 PROS1P07225 676 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 CALML3P27482 149 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 PMLP29590 882 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 HOXC8P31273 242 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 IKQ13123 557 aaPredicted RBP8.63□□□□□ -1.03
COL9A1-209ENST00000489861 PAN2Q504Q3 1202 aaKnown RBP8.63□□□□□ -1.03
COL9A1-209ENST00000489861 ZKSCAN2Q63HK3 967 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 GPR161Q8N6U8 529 aaKnown RBP8.63□□□□□ -1.03
COL9A1-209ENST00000489861 FEZF2Q8TBJ5 459 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 CLEC4DQ8WXI8 215 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 APBB2Q92870 758 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 CDCA3Q99618 268 aaPredicted RBP8.63□□□□□ -1.03
COL9A1-209ENST00000489861 KATNAL1Q9BW62 490 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 MTMR4Q9NYA4 1195 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 FBXL21Q9UKT6 434 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 ZMIZ1Q9ULJ6 1067 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 LOC400499M0QZD8 3231 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 FSCN2O14926 492 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 KINO60870 393 aaKnown RBP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 DCNP07585 359 aaKnown RBP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 HOXB8P17481 243 aaPredicted RBP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 MCCP23508 829 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 GATMP50440 423 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 HSP90AB4PQ58FF6 505 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 SPECC1Q5M775 1068 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 SEPT14Q6ZU15 432 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 KCTD1Q719H9 257 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 ERC1Q8IUD2 1116 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 C1orf210Q8IVY1 113 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 CMTR2Q8IYT2 770 aaKnown RBP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 RASGRP4Q8TDF6 673 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 FRAT1Q92837 279 aaPredicted RBP8.62□□□□□ -1.03
COL9A1-209ENST00000489861 ATP6V0A1Q93050 837 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 ADAM7Q9H2U9 754 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 USP18Q9UMW8 372 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 DUSP12Q9UNI6 340 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 DOCK5Q9H7D0 1870 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 MYO18BQ8IUG5 2567 aa8.62□□□□□ -1.03
COL9A1-209ENST00000489861 STK25O00506 426 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 SLC30A4O14863 429 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 NARSO43776 548 aaKnown RBP8.61□□□□□ -1.03
COL9A1-209ENST00000489861 PLA2G6O60733 806 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 PRDM1O75626 825 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 TTLL1O95922 423 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 CHRNA1P02708 482 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 HOXD8P13378 290 aaPredicted RBP8.61□□□□□ -1.03
COL9A1-209ENST00000489861 GLULP15104 373 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 SLC1A4P43007 532 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 RPS6P62753 249 aaKnown RBP8.61□□□□□ -1.03
COL9A1-209ENST00000489861 SHC2P98077 582 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 TBC1D8BQ0IIM8 1120 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 APOBRQ0VD83 1088 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 FAM26DQ5JW98 314 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 LRSAM1Q6UWE0 723 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 RTN4RL1Q86UN2 441 aaPredicted RBP8.61□□□□□ -1.03
COL9A1-209ENST00000489861 AMOTL1Q8IY63 956 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 LINC01599Q8WXQ3 324 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 GMCL1Q96IK5 515 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 NECTIN4Q96NY8 510 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 AAASQ9NRG9 546 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 DDX41Q9UJV9 622 aaKnown RBP8.61□□□□□ -1.03
COL9A1-209ENST00000489861 SYNPO2Q9UMS6 1093 aa8.61□□□□□ -1.03
COL9A1-209ENST00000489861 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 C17orf102A2RUQ5 167 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 HIDE1A8MVS5 230 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 C1QTNF9BB2RNN3 333 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 CAND2O75155 1236 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
COL9A1-209ENST00000489861 C1QTNF9P0C862 333 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 SRGAP2BP0DMP2 458 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 GHRP10912 638 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 TRIM27P14373 513 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 UBE3AQ05086 875 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 TDGQ13569 410 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 TTF1Q15361 905 aaPredicted RBP8.6□□□□□ -1.03
COL9A1-209ENST00000489861 N4BP2L1Q5TBK1 243 aaPredicted RBP8.6□□□□□ -1.03
COL9A1-209ENST00000489861 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 RNF207Q6ZRF8 634 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 PLCD3Q8N3E9 789 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 DNERQ8NFT8 737 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 PPTC7Q8NI37 304 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
COL9A1-209ENST00000489861 C16orf70Q9BSU1 422 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 RNPEPQ9H4A4 650 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 EHMT1Q9H9B1 1298 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 TBC1D17Q9HA65 648 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 CYP26B1Q9NR63 512 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
COL9A1-209ENST00000489861 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
COL9A1-209ENST00000489861 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.6□□□□□ -1.03
COL9A1-209ENST00000489861 SLC4A4Q9Y6R1 1079 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms