RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CHP1Q99653 195 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 LRRC2Q9BYS8 371 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 PHACTR1Q9C0D0 580 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 RAB17Q9H0T7 212 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 NCOA5Q9HCD5 579 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 POLD4Q9HCU8 107 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 GALNT8Q9NY28 637 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 AATFQ9NY61 560 aaKnown RBP eCLIP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 ADAM22Q9P0K1 906 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM153AQ9UHL3 310 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 TSPYL4Q9UJ04 414 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 NFU1Q9UMS0 254 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 PLAAQ9Y263 795 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 ABCC12Q96J65 1359 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 TMEM221A6NGB7 291 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 H0YGN5 161 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 RNF225M0QZC1 329 aaPredicted RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 SH2B2O14492 632 aaPredicted RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 FOXN1O15353 648 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC166P0CW27 439 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF24P17028 368 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 YY1P25490 414 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 TMOD1P28289 359 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 STAT6P42226 847 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 MAGEA10P43363 369 aaPredicted RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 INHBCP55103 352 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 MPP3Q13368 585 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 CUL4BQ13620 913 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 SLC4A8Q2Y0W8 1093 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 GALNTL6Q49A17 601 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 SH2D4BQ5SQS7 431 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 TTC39AQ5SRH9 613 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 ERMARDQ5T6L9 678 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 SFMBT2Q5VUG0 894 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 IRGCQ6NXR0 463 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 WAPLQ7Z5K2 1190 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 KIAA0825Q8IV33 1275 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 RNF168Q8IYW5 571 aaPredicted RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 SPICE1Q8N0Z3 855 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 TMTC2Q8N394 836 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 LINS1Q8NG48 757 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 CFAP61Q8NHU2 1237 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 IFT81Q8WYA0 676 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 LRRC45Q96CN5 670 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 IFT43Q96FT9 208 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF317Q96PQ6 595 aaPredicted RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 XPO6Q96QU8 1125 aaKnown RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 MAP3K14Q99558 947 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 PREBQ9HCU5 417 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 ARHGEF3Q9NR81 526 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 CABP1Q9NZU7 370 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 CTTNBP2NLQ9P2B4 639 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 LUC7L2Q9Y383 392 aaKnown RBP5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 HYOU1Q9Y4L1 999 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 NUB1Q9Y5A7 615 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 NFS1Q9Y697 457 aa5.21□□□□□ -1.57
SNRNP40-206ENST00000489853 STRCP1A6NGW2 1772 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 CACNA1FO60840 1977 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 AFF2P51816 1311 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 KIF28PB7ZC32 967 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 TPD52L2O43399 206 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 LZTS3O60299 673 aaPredicted RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 USO1O60763 962 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 TMCC1O94876 653 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 VIL1P09327 827 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 FAM200BP0CF97 657 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 RARAP10276 462 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 ACADSP16219 412 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 CALB2P22676 271 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MATR3P43243 847 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MSH2P43246 934 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 GJA8P48165 433 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 PEX5P50542 639 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MMP16P51512 607 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 COPB1P53618 953 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 NCALDP61601 193 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 KCNJ2P63252 427 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 KRT31Q15323 416 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 TTF1Q15361 905 aaPredicted RBP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MEA1Q16626 185 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 ERFEQ4G0M1 354 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MCMDC2Q4G0Z9 681 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 MSS51Q4VC12 460 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 TRIM68Q6AZZ1 485 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 STOX1Q6ZVD7 989 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 CCDC80Q76M96 950 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 SH3RF1Q7Z6J0 888 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 SMYD1Q8NB12 490 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 FBF1Q8TES7 1133 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 NCSTNQ92542 709 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 IQCDQ96DY2 449 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 RMDN2Q96LZ7 410 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 ASB16Q96NS5 453 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 FAM129AQ9BZQ8 928 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 PCDH18Q9HCL0 1135 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 EPB41L5Q9HCM4 733 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 SAMD15Q9P1V8 674 aa5.21□□□□□ -1.58
SNRNP40-206ENST00000489853 CNOT8Q9UFF9 292 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms