RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TRAF5O00463 557 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 N4BP3O15049 544 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 ASGR2P07307 311 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 GLDCP23378 1020 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 PMLP29590 882 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 NKX3-2P78367 333 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 CACNB2Q08289 660 aaPredicted RBP7.96□□□□□ -1.14
VPS26A-206ENST00000489794 LDHDQ86WU2 507 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 ARRDC4Q8NCT1 418 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 MZB1Q8WU39 189 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 LEO1Q8WVC0 666 aaPredicted RBP7.96□□□□□ -1.14
VPS26A-206ENST00000489794 KCNN1Q92952 543 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.14
VPS26A-206ENST00000489794 H7C1D1 291 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 IBSPP21815 317 aaPredicted RBP7.95□□□□□ -1.14
VPS26A-206ENST00000489794 FBLN1P23142 703 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 CNGA1P29973 690 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 BTBD8Q5XKL5 378 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 PKN3Q6P5Z2 889 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 CLEC4DQ8WXI8 215 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 SLC38A3Q99624 504 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 FAN1Q9Y2M0 1017 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 PCDHA5Q9Y5H7 936 aa7.95□□□□□ -1.14
VPS26A-206ENST00000489794 TMEM253P0C7T8 217 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 FAHP16930 419 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 PTPN1P18031 435 aaKnown RBP7.94□□□□□ -1.14
VPS26A-206ENST00000489794 HERVK_113P62684 666 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 IRF9Q00978 393 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 PCBP1Q15365 356 aaKnown RBP eCLIP7.94□□□□□ -1.14
VPS26A-206ENST00000489794 ZNF174Q15697 407 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 LCE1DQ5T752 114 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 OGFOD2Q6N063 350 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 NOSTRINQ8IVI9 506 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 CD244Q9BZW8 370 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 KCNH7Q9NS40 1196 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 B3GALT1Q9Y5Z6 326 aa7.94□□□□□ -1.14
VPS26A-206ENST00000489794 ZEB2O60315 1214 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 MED14OSP0DP75 135 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 CYP2C8P10632 490 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 CDR1P51861 262 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 DLG4P78352 724 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 DSG1Q02413 1049 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 MESP2Q0VG99 397 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 PAN2Q504Q3 1202 aaKnown RBP7.93□□□□□ -1.14
VPS26A-206ENST00000489794 B3GNT8Q7Z7M8 397 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 USP7Q93009 1102 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 ACSS2Q9NR19 701 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 RIC8BQ9NVN3 520 aa7.93□□□□□ -1.14
VPS26A-206ENST00000489794 NFIBO00712 420 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 BRINP1O60477 761 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 BUB1BO60566 1050 aaPredicted RBP7.92□□□□□ -1.14
VPS26A-206ENST00000489794 FZD5Q13467 585 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 CC2D1AQ6P1N0 951 aaPredicted RBP7.92□□□□□ -1.14
VPS26A-206ENST00000489794 SYDE1Q6ZW31 735 aaPredicted RBP7.92□□□□□ -1.14
VPS26A-206ENST00000489794 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 PASD1Q8IV76 773 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 POU5F2Q8N7G0 328 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 DLG3Q92796 817 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 SIGLEC10Q96LC7 697 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 TTC1Q99614 292 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 PCIF1Q9H4Z3 704 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 MCM8Q9UJA3 840 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 TELO2Q9Y4R8 837 aa7.92□□□□□ -1.14
VPS26A-206ENST00000489794 SCDO00767 359 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 CYP17A1P05093 508 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 ZBTB48P10074 688 aaPredicted RBP7.91□□□□□ -1.14
VPS26A-206ENST00000489794 IGFBP6P24592 240 aaPredicted RBP7.91□□□□□ -1.14
VPS26A-206ENST00000489794 SDHAP31040 664 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 NFKB2Q00653 900 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 SEPT7Q16181 437 aaKnown RBP7.91□□□□□ -1.14
VPS26A-206ENST00000489794 PTPROQ16827 1216 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 TEPPQ6URK8 271 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 CD300LDQ6UXZ3 194 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 AFAP1L2Q8N4X5 818 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 EFHBQ8N7U6 833 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 SMC1BQ8NDV3 1235 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 TMEM209Q96SK2 561 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 BCAS3Q9H6U6 928 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 IFT22Q9H7X7 185 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 GCM1Q9NP62 436 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 IRAK3Q9Y616 596 aa7.91□□□□□ -1.14
VPS26A-206ENST00000489794 ARID1BQ8NFD5 2236 aaPredicted RBP7.91□□□□□ -1.14
VPS26A-206ENST00000489794 FAM90A27PA6NNH2 459 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 LRG1P02750 347 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 LTFP02788 710 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 C4BPAP04003 597 aaKnown RBP7.9□□□□□ -1.14
VPS26A-206ENST00000489794 LSSP48449 732 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 FNTBP49356 437 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 KPNA1P52294 538 aaPredicted RBP7.9□□□□□ -1.14
VPS26A-206ENST00000489794 IL2P60568 153 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 GRIN1Q05586 938 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 CR1LQ2VPA4 569 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 NME9Q86XW9 330 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 IGDCC3Q8IVU1 814 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 RBM12BQ8IXT5 1001 aaKnown RBP7.9□□□□□ -1.14
VPS26A-206ENST00000489794 WRNIP1Q96S55 665 aa7.9□□□□□ -1.14
VPS26A-206ENST00000489794 APOBEC2Q9Y235 224 aaKnown RBP7.9□□□□□ -1.14
VPS26A-206ENST00000489794 SPO11Q9Y5K1 396 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms