RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 INPP4AQ96PE3 977 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-207ENST00000489692 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
GGPS1-207ENST00000489692 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
GGPS1-207ENST00000489692 SPATA31C2B4DYI2 1134 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 KIF28PB7ZC32 967 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 H3BRB1 525 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 LGALS2P05162 132 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 MYOGP15173 224 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 EVCP57679 992 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 ZNF200P98182 395 aaPredicted RBP13.4□□□□□ -0.26
GGPS1-207ENST00000489692 PTK7Q13308 1070 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 METTL7BQ6UX53 244 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 ATP6V0A1Q93050 837 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 TUT1Q9H6E5 874 aaKnown RBP13.4□□□□□ -0.26
GGPS1-207ENST00000489692 BCAS3Q9H6U6 928 aa13.4□□□□□ -0.26
GGPS1-207ENST00000489692 ZNF215Q9UL58 517 aaPredicted RBP13.4□□□□□ -0.26
GGPS1-207ENST00000489692 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
GGPS1-207ENST00000489692 LCTP09848 1927 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 HAS3O00219 553 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 CKBP12277 381 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 ICAM3P32942 547 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 THPOP40225 353 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 METAP2P50579 478 aaKnown RBP eCLIP13.39□□□□□ -0.27
GGPS1-207ENST00000489692 ADCY7P51828 1080 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 MTMR1Q13613 665 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
GGPS1-207ENST00000489692 WWC2Q6AWC2 1192 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 GIMAP8Q8ND71 665 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-207ENST00000489692 DHX38Q92620 1227 aaKnown RBP13.39□□□□□ -0.27
GGPS1-207ENST00000489692 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-207ENST00000489692 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 PCDHA6Q9UN73 950 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 YBX2Q9Y2T7 364 aaKnown RBP13.39□□□□□ -0.27
GGPS1-207ENST00000489692 KIF3AQ9Y496 699 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 PCDHA8Q9Y5H6 950 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 PCDHA11Q9Y5I1 949 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 FRMPD4Q14CM0 1322 aa13.39□□□□□ -0.27
GGPS1-207ENST00000489692 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 PARNO95453 639 aaKnown RBP13.38□□□□□ -0.27
GGPS1-207ENST00000489692 GNAT1P11488 350 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 UBE2HP62256 183 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 HMGN5P82970 282 aaKnown RBP13.38□□□□□ -0.27
GGPS1-207ENST00000489692 AKAP17AQ02040 695 aaKnown RBP13.38□□□□□ -0.27
GGPS1-207ENST00000489692 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 TRIM50Q86XT4 487 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 MICALL1Q8N3F8 863 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 GLG1Q92896 1179 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 BRF1Q92994 677 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 SLC9A7Q96T83 725 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 GPR20Q99678 358 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
GGPS1-207ENST00000489692 COL6A3P12111 3177 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-207ENST00000489692 SMCO2A6NFE2 343 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 CA3P07451 260 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-207ENST00000489692 ZNF76P36508 570 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 ARHGAP4P98171 946 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 CCDC85BQ15834 202 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-207ENST00000489692 ZNF618Q5T7W0 954 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 LRSAM1Q6UWE0 723 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 GPRASP2Q96D09 838 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 SETD4Q9NVD3 440 aa13.37□□□□□ -0.27
GGPS1-207ENST00000489692 RSPH10B2B2RC85 870 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 TREHO43280 583 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 TLL1O43897 1013 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-207ENST00000489692 CTSHP09668 335 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 RSPH10BP0C881 870 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 ITGB5P18084 799 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 MARK3P27448 753 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-207ENST00000489692 KRT85P78386 507 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 IKBKEQ14164 716 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 CNKSR3Q6P9H4 555 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 PHOSPHO2Q8TCD6 241 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 SEPT1Q8WYJ6 367 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 WNT8BQ93098 351 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 VWCEQ96DN2 955 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 RIC8AQ9NPQ8 531 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 JADE2Q9NQC1 790 aa13.36□□□□□ -0.27
GGPS1-207ENST00000489692 hCG_1984214I3L0E3 225 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 STXBP3O00186 592 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms