RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
HDAC6-231ENST00000488905 C17orf80Q9BSJ5 609 aa21.19■□□□□ 0.98
HDAC6-231ENST00000488905 SLC27A2O14975 620 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 CALM1P0DP23 149 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 CALM2P0DP24 149 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 CALM3P0DP25 149 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 LIFRP42702 1097 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 CMTR1Q8N1G2 835 aaKnown RBP21.18■□□□□ 0.98
HDAC6-231ENST00000488905 FBXO22Q8NEZ5 403 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 CDHR1Q96JP9 859 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 OSBPL7Q9BZF2 842 aa21.18■□□□□ 0.98
HDAC6-231ENST00000488905 KCNA2P16389 499 aa21.17■□□□□ 0.98
HDAC6-231ENST00000488905 TCF7P36402 384 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-231ENST00000488905 APBB2Q92870 758 aa21.17■□□□□ 0.98
HDAC6-231ENST00000488905 PSTPIP2Q9H939 334 aa21.17■□□□□ 0.98
HDAC6-231ENST00000488905 NRCAMQ92823 1304 aa21.17■□□□□ 0.98
HDAC6-231ENST00000488905 MYO7AQ13402 2215 aa21.16■□□□□ 0.98
HDAC6-231ENST00000488905 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.16■□□□□ 0.98
HDAC6-231ENST00000488905 CREB3L3Q68CJ9 461 aa21.16■□□□□ 0.98
HDAC6-231ENST00000488905 RAB11FIP4Q86YS3 637 aa21.16■□□□□ 0.98
HDAC6-231ENST00000488905 TOP1MTQ969P6 601 aa21.16■□□□□ 0.98
HDAC6-231ENST00000488905 YME1L1Q96TA2 773 aa21.16■□□□□ 0.98
HDAC6-231ENST00000488905 ESYT1Q9BSJ8 1104 aa21.16■□□□□ 0.98
HDAC6-231ENST00000488905 IFIH1Q9BYX4 1025 aaKnown RBP21.16■□□□□ 0.98
HDAC6-231ENST00000488905 hCG_1642624A0A1W2PR95 340 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 ATP9AO75110 1047 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 ITGB5P18084 799 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 UBE2SQ16763 222 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 FAM26DQ5JW98 314 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 TMTC3Q6ZXV5 915 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 SAMD11Q96NU1 681 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 LRRC2Q9BYS8 371 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 UBE2ZQ9H832 354 aaPredicted RBP21.15■□□□□ 0.98
HDAC6-231ENST00000488905 SLC12A7Q9Y666 1083 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 TTC3P53804 2025 aa21.15■□□□□ 0.98
HDAC6-231ENST00000488905 SPDYE3A6NKU9 549 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 UPP2O95045 317 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 PPFIA1Q13136 1202 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 MTMR1Q13613 665 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 EPC2Q52LR7 807 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 TAF2Q6P1X5 1199 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 RUFY4Q6ZNE9 571 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 MICU3Q86XE3 530 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 C1QTNF1Q9BXJ1 281 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 ANO2Q9NQ90 1003 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 RAPGEFL1Q9UHV5 662 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 C5orf42Q9H799 3197 aa21.14■□□□□ 0.97
HDAC6-231ENST00000488905 KIAA1671Q9BY89 1806 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 MARK3P27448 753 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 NECTIN1Q15223 517 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 HEATR3Q7Z4Q2 680 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 RPAINQ86UA6 219 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 SGMS1Q86VZ5 419 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 CCDC82Q8N4S0 544 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 SEPT1Q8WYJ6 367 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 MRPL38Q96DV4 380 aaKnown RBP21.13■□□□□ 0.97
HDAC6-231ENST00000488905 ERAP1Q9NZ08 941 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 PKD2L1Q9P0L9 805 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 TUBE1Q9UJT0 475 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 UBIAD1Q9Y5Z9 338 aa21.13■□□□□ 0.97
HDAC6-231ENST00000488905 CNTNAP5Q8WYK1 1306 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 GSTTP1A0A1W2PQM5 241 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 CHRNA1P02708 482 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 GHRP10912 638 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 GRIK4Q16099 956 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 PTPROQ16827 1216 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 FANCBQ8NB91 859 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 PCDHA6Q9UN73 950 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 PCDHA8Q9Y5H6 950 aa21.12■□□□□ 0.97
HDAC6-231ENST00000488905 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-231ENST00000488905 MGAT3Q09327 533 aa21.11■□□□□ 0.97
HDAC6-231ENST00000488905 TIGD5Q53EQ6 642 aa21.11■□□□□ 0.97
HDAC6-231ENST00000488905 GLG1Q92896 1179 aa21.11■□□□□ 0.97
HDAC6-231ENST00000488905 EHMT1Q9H9B1 1298 aa21.11■□□□□ 0.97
HDAC6-231ENST00000488905 JADE2Q9NQC1 790 aa21.11■□□□□ 0.97
HDAC6-231ENST00000488905 MBLAC1A4D2B0 266 aaPredicted RBP21.1■□□□□ 0.97
HDAC6-231ENST00000488905 H3BNC9 293 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 KCNA5P22460 613 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 WWC2Q6AWC2 1192 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 APOA5Q6Q788 366 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 RSPH3Q86UC2 560 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 TMEM192Q8IY95 271 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 SMARCAD1Q9H4L7 1026 aa21.1■□□□□ 0.97
HDAC6-231ENST00000488905 JPH1Q9HDC5 661 aaPredicted RBP21.1■□□□□ 0.97
HDAC6-231ENST00000488905 MAFGO15525 162 aa21.09■□□□□ 0.97
HDAC6-231ENST00000488905 GPM6BQ13491 265 aa21.09■□□□□ 0.97
HDAC6-231ENST00000488905 LPIN1Q14693 890 aa21.09■□□□□ 0.97
HDAC6-231ENST00000488905 LEXMQ3ZCV2 418 aa21.09■□□□□ 0.97
HDAC6-231ENST00000488905 MARCH8Q5T0T0 291 aa21.09■□□□□ 0.97
HDAC6-231ENST00000488905 ADGRA3Q8IWK6 1321 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 FBXO47Q5MNV8 452 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 RNF20Q5VTR2 975 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 PPP1R18Q6NYC8 613 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 SYNE3Q6ZMZ3 975 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 DNAJB3Q8WWF6 145 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 EPHX3Q9H6B9 360 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 RC3H2Q9HBD1 1191 aaKnown RBP21.08■□□□□ 0.97
HDAC6-231ENST00000488905 RBM28Q9NW13 759 aaKnown RBP21.08■□□□□ 0.97
HDAC6-231ENST00000488905 SLC9A2Q9UBY0 812 aa21.08■□□□□ 0.97
HDAC6-231ENST00000488905 MYH9P35579 1960 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms