RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SWAP70Q9UH65 585 aa14□□□□□ -0.17
CLIC4-202ENST00000488683 AJAP1Q9UKB5 411 aaPredicted RBP14□□□□□ -0.17
CLIC4-202ENST00000488683 FAM86B1E9PN63 330 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 FAM86B2P0C5J1 330 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 CRKP46108 304 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 MRPL12P52815 198 aaKnown RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 FAM83BQ5T0W9 1011 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 SND1Q7KZF4 910 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 PIGOQ8TEQ8 1089 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.99□□□□□ -0.177e-6■■■■■ 74.5
CLIC4-202ENST00000488683 PCDHA2Q9Y5H9 948 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 COL4A3BPQ9Y5P4 624 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 A0A087X0T9 212 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ANO9A1A5B4 782 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 FAM228BP0C875 321 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 CYP11B2P19099 503 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 KLRC1P26715 233 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 CASP4P49662 377 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 DCAF17Q5H9S7 520 aaPredicted RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 CATSPER3Q86XQ3 398 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ANO3Q9BYT9 981 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 AGPSO00116 658 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 MEIS2O14770 477 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 PALMO75781 387 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 LCA5LO95447 670 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ADAM9Q13443 819 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ASTE1Q2TB18 679 aaPredicted RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 HSP90B2PQ58FF3 399 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
CLIC4-202ENST00000488683 SPATA4Q8NEY3 305 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
CLIC4-202ENST00000488683 ABCB11O95342 1321 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 ZC3H4Q9UPT8 1303 aaKnown RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 TACC1O75410 805 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 PSMD2Q13200 908 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 KLHDC7AQ5VTJ3 777 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 CCNI2Q6ZMN8 369 aaPredicted RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 TSEN2Q8NCE0 465 aaKnown RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 GBP3Q9H0R5 595 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 TDRD3Q9H7E2 651 aaKnown RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 FAM198AQ9UFP1 575 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 SUGT1Q9Y2Z0 365 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 USO1O60763 962 aaKnown RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 CERKLQ49MI3 558 aaPredicted RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 HYIQ5T013 277 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 TCERG1LQ5VWI1 586 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 SFR1Q86XK3 245 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 TEKT1Q969V4 418 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 TSG101Q99816 390 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 SH2D3AQ9BRG2 576 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 MYO3BQ8WXR4 1341 aa13.98□□□□□ -0.17
CLIC4-202ENST00000488683 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
CLIC4-202ENST00000488683 C10orf71Q711Q0 1435 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 EIF3JO75822 258 aaKnown RBP13.97□□□□□ -0.17
CLIC4-202ENST00000488683 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
CLIC4-202ENST00000488683 HLA-DOAP06340 250 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 FAM153BP0C7A2 387 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 NR2F2P24468 414 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 HOXD13P35453 343 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 ECE1P42892 770 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 FKBP3Q00688 224 aaKnown RBP13.97□□□□□ -0.17
CLIC4-202ENST00000488683 CKAP4Q07065 602 aaKnown RBP13.97□□□□□ -0.17
CLIC4-202ENST00000488683 FAM153CQ494X1 144 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 CCDC181Q5TID7 509 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 CDAN1Q8IWY9 1227 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 TXLNBQ8N3L3 684 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
CLIC4-202ENST00000488683 TRIM58Q8NG06 486 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 IFT81Q8WYA0 676 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 REEP2Q9BRK0 252 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 TSGA10Q9BZW7 698 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 KCNMB3Q9NPA1 279 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 PKD2L1Q9P0L9 805 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 FAM153AQ9UHL3 310 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 JRKLQ9Y4A0 524 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 HYOU1Q9Y4L1 999 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 SPATA31A6Q5VVP1 1343 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 EML1O00423 815 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 KCNH2Q12809 1159 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 CTTNQ14247 550 aaKnown RBP13.97□□□□□ -0.17
CLIC4-202ENST00000488683 PLS1Q14651 629 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 HHIPL2Q6UWX4 724 aa13.97□□□□□ -0.17
CLIC4-202ENST00000488683 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.17
CLIC4-202ENST00000488683 GUCY2FP51841 1108 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 ARHGAP4P98171 946 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 COG2Q14746 738 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 ZC2HC1CQ53FD0 456 aaPredicted RBP13.96□□□□□ -0.17
CLIC4-202ENST00000488683 KIAA1755Q5JYT7 1200 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 SFMBT2Q5VUG0 894 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 KCTD16Q68DU8 428 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms