RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 GRB10Q13322 594 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 XRRA1Q6P2D8 792 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 GPRASP2Q96D09 838 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 ASB2Q96Q27 587 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 PCYT2Q99447 389 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 MTUS1Q9ULD2 1270 aa12.89□□□□□ -0.35
PCYT1A-215ENST00000488235 KIF28PB7ZC32 967 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 STXBP3O00186 592 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 ZBTB43O43298 467 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 CDC45O75419 566 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 PARNO95453 639 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 MTMR1Q13613 665 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 IKBKEQ14164 716 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 RTN1Q16799 776 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 RNF20Q5VTR2 975 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 NECAB3Q96P71 396 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 TMEM260Q9NX78 707 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 COL4A4P53420 1690 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
PCYT1A-215ENST00000488235 KLF18A0A0U1RQI7 1052 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 LINC01553A4QN01 128 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 CHRNA1P02708 482 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 ARP10275 920 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 RAD9AQ99638 391 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 TRIOO75962 3097 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
PCYT1A-215ENST00000488235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 SPDYE3A6NKU9 549 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 KCNQ1P51787 676 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 NAPAP54920 295 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 ITGB3BPQ13352 177 aaPredicted RBP12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 SYNE3Q6ZMZ3 975 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 KCNB2Q92953 911 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 UIMC1Q96RL1 719 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 MXRA8Q9BRK3 442 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 KCNH7Q9NS40 1196 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 ZNF215Q9UL58 517 aaPredicted RBP12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 MICAL3Q7RTP6 2002 aa12.86□□□□□ -0.35
PCYT1A-215ENST00000488235 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 ERVK-21P61565 698 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 MGAT3Q09327 533 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 PPFIA1Q13136 1202 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 GRIK4Q16099 956 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 FAM26DQ5JW98 314 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 Q6ZUG5 572 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 ADAMTS19Q8TE59 1207 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 SIP14410 1827 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 NRCAMQ92823 1304 aa12.85□□□□□ -0.35
PCYT1A-215ENST00000488235 MBLAC1A4D2B0 266 aaPredicted RBP12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 SMCO2A6NFE2 343 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 FAM86B1E9PN63 330 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 GTPBP6O43824 516 aaPredicted RBP12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 EFCAB14O75071 495 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 UPP2O95045 317 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 CCNE2O96020 404 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 FAM86B2P0C5J1 330 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 GHRP10912 638 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 GNAT1P11488 350 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 BMP1P13497 986 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 HSPA4P34932 840 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 ADCY7P51828 1080 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 IGBP1P78318 339 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 LPIN1Q14693 890 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 SEPT8Q92599 483 aa12.84□□□□□ -0.35
PCYT1A-215ENST00000488235 GLG1Q92896 1179 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms