RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 NOS2P35228 1153 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 RGS2P41220 211 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 PRMT2P55345 433 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 TROAPQ12815 778 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 USH1GQ495M9 461 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 TBCELQ5QJ74 424 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 PRAMEF19Q5SWL8 479 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ANO1Q5XXA6 986 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 BTNL9Q6UXG8 535 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 SLCO4C1Q6ZQN7 724 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 DPP9Q86TI2 863 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 FAM160B2Q86V87 743 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ZNF654Q8IZM8 581 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 SHCBP1Q8NEM2 672 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 TRPV1Q8NER1 839 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 CHURC1Q8WUH1 139 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 SOCS4Q8WXH5 440 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 FGD4Q96M96 766 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 NEK1Q96PY6 1258 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 APBA2Q99767 749 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 USP26Q9BXU7 913 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 NEUROD4Q9HD90 331 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 BRPF3Q9ULD4 1205 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 CCPG1Q9ULG6 757 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 IVNS1ABPQ9Y6Y0 642 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ZNF236Q9UL36 1845 aa9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ZNFX1Q9P2E3 1918 aaKnown RBP9.07□□□□□ -0.96
NECTIN3-209ENST00000488016 ASTN1O14525 1302 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 hCG_1642624A0A1W2PR95 340 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 ERICH2A1L162 156 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 A6NJR5 290 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 SHISA8B8ZZ34 492 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 C2CD2LO14523 706 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 CYTH3O43739 400 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 DHX16O60231 1041 aaKnown RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 PLA2G6O60733 806 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 PPP1R11O60927 126 aaPredicted RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 HMGCRP04035 888 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 FAM157BP0CG42 384 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 ARAFP10398 606 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 FCER1AP12319 257 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 PTGS1P23219 599 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 MCM5P33992 734 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 EXOSC10Q01780 885 aaKnown RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 CNTN2Q02246 1040 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 TNP2Q05952 138 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 CACNB2Q08289 660 aaPredicted RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 GRM4Q14833 912 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 CDC37Q16543 378 aaPredicted RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 QRICH1Q2TAL8 776 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 NFXL1Q6ZNB6 911 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 MICU3Q86XE3 530 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 HOMER1Q86YM7 354 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 ADGRF4Q8IZF3 695 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 TBC1D5Q92609 795 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 KCNB2Q92953 911 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 LENG1Q96BZ8 264 aaPredicted RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 CALR3Q96L12 384 aaKnown RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 DEFB118Q96PH6 123 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 RNF208Q9H0X6 261 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 MROH8Q9H579 483 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 JMJD4Q9H9V9 463 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 A1CFQ9NQ94 594 aaKnown RBP9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
NECTIN3-209ENST00000488016 MCM3APO60318 1980 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 KLRF2D3W0D1 207 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 M0R2N6 131 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 ATP2A1O14983 1001 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 REC8O95072 547 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 SLC25A27O95847 323 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 ICAM1P05362 532 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 CD33P20138 364 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 CASTP20810 708 aaKnown RBP9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 PSMA6P60900 246 aaKnown RBP9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 APOBRQ0VD83 1088 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 KCTD2Q14681 263 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 ZNF792Q3KQV3 632 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 ASPRV1Q53RT3 343 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 CCDC178Q5BJE1 867 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 SLC30A10Q6XR72 485 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 Q6ZUG5 572 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 SIX5Q8N196 739 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 ANKRD35Q8N283 1001 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 CCDC82Q8N4S0 544 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 CLEC4DQ8WXI8 215 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 MAML3Q96JK9 1138 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 PIGSQ96S52 555 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 UPF3BQ9BZI7 483 aaKnown RBP9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 ACAD9Q9H845 621 aa9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 GPC6Q9Y625 555 aaPredicted RBP9.05□□□□□ -0.96
NECTIN3-209ENST00000488016 CCDC69A6NI79 296 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 IGHA2P01877 340 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 HOXC6P09630 235 aa9.04□□□□□ -0.96
NECTIN3-209ENST00000488016 OAZ1P54368 228 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms