RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 STIM1Q13586 685 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 CTTNQ14247 550 aaKnown RBP10.52□□□□□ -0.72
SF3B1-211ENST00000487698 APTXQ7Z2E3 356 aaKnown RBP10.52□□□□□ -0.72
SF3B1-211ENST00000487698 HPS3Q969F9 1004 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 DHTKD1Q96HY7 919 aaPredicted RBP10.52□□□□□ -0.72
SF3B1-211ENST00000487698 IWS1Q96ST2 819 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.72
SF3B1-211ENST00000487698 PKD2L1Q9P0L9 805 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 WRAP73Q9P2S5 460 aaPredicted RBP10.52□□□□□ -0.72
SF3B1-211ENST00000487698 PLXNA1Q9UIW2 1896 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 MCM3APO60318 1980 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 GOLGA6L6A8MZA4 724 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 SOCS7O14512 581 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 ATP9AO75110 1047 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 CELF2O95319 508 aaKnown RBP10.52□□□□□ -0.73
SF3B1-211ENST00000487698 SSBP05455 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
SF3B1-211ENST00000487698 CETPP11597 493 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 ERCC3P19447 782 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 GTF2A2P52657 109 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 PMS1P54277 932 aaKnown RBP10.52□□□□□ -0.73
SF3B1-211ENST00000487698 CNTN2Q02246 1040 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 TTI2Q6NXR4 508 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 NLRX1Q86UT6 975 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 NCAPG2Q86XI2 1143 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 ANKRD35Q8N283 1001 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 FAM133AQ8N9E0 248 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 LXNQ9BS40 222 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 BHMT2Q9H2M3 363 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 R3HDMLQ9H3Y0 253 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.73
SF3B1-211ENST00000487698 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 ZKSCAN5Q9Y2L8 839 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 PCDHA2Q9Y5H9 948 aa10.52□□□□□ -0.73
SF3B1-211ENST00000487698 MYH9P35579 1960 aaKnown RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 NPHP3-ACAD11A0A0J9YXS1 232 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 TRIM49BA6NDI0 452 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 ESPNB1AK53 854 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 DDX39AO00148 427 aaKnown RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CBFA2T2O43439 604 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 ITGBL1O95965 494 aaPredicted RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CCNE2O96020 404 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 SERPINC1P01008 464 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 ZBTB48P10074 688 aaPredicted RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 IDEP14735 1019 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 KCNA2P16389 499 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 EDNRBP24530 442 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CCNE1P24864 410 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 ALDH5A1P51649 535 aaPredicted RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 UBASH3AP57075 661 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CCDC144BQ3MJ40 725 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 HSP90AA4PQ58FG1 418 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 TPH2Q8IWU9 490 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 GUF1Q8N442 669 aaKnown RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 C2orf69Q8N8R5 385 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 GTF3C2Q8WUA4 911 aaPredicted RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 BRI3BPQ8WY22 251 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 P2RX5Q93086 422 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 SLC39A2Q9NP94 309 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 PANK4Q9NVE7 773 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 NRBP1Q9UHY1 535 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 COBLO75128 1261 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 LYPLA2O95372 231 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 TPM3P06753 285 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 KRT76Q01546 638 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 GIT2Q14161 759 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 Q3C1V9 767 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 FAM26FQ5R3K3 315 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CST9Q5W186 159 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 DRC7Q8IY82 874 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 SHCBP1Q8NEM2 672 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 CDHR1Q96JP9 859 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 NACC1Q96RE7 527 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 DUSP9Q99956 384 aaKnown RBP10.51□□□□□ -0.73
SF3B1-211ENST00000487698 SENP7Q9BQF6 1050 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 REEP2Q9BRK0 252 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 RUSC1Q9BVN2 902 aa10.51□□□□□ -0.73
SF3B1-211ENST00000487698 NFASCO94856 1347 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 CCL15-CCL14A0A0B4J2E2 113 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 A0A1B0GTH6 734 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 BICDL2A1A5D9 508 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 SOWAHBA6NEL2 793 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 SPATA31C2B4DYI2 1134 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 BTBD19C9JJ37 291 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 P4HBP07237 508 aaKnown RBP10.5□□□□□ -0.73
SF3B1-211ENST00000487698 CYP2C8P10632 490 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 PTGS1P23219 599 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 SFNP31947 248 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 ICAM3P32942 547 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 JAK3P52333 1124 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 ERVK-24P63145 666 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 STXBP2Q15833 593 aa10.5□□□□□ -0.73
SF3B1-211ENST00000487698 CCL15Q16663 113 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms