RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GDPD5Q8WTR4 605 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 LMBR1Q8WVP7 490 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 NECAB3Q96P71 396 aaPredicted RBP14.01□□□□□ -0.17
VPS16-208ENST00000487461 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
VPS16-208ENST00000487461 MTUS1Q9ULD2 1270 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 INSL6Q9Y581 213 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 CAND2O75155 1236 aa14□□□□□ -0.17
VPS16-208ENST00000487461 HTRA4P83105 476 aaPredicted RBP14□□□□□ -0.17
VPS16-208ENST00000487461 AAK1Q2M2I8 961 aa14□□□□□ -0.17
VPS16-208ENST00000487461 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
VPS16-208ENST00000487461 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
VPS16-208ENST00000487461 RASEFQ8IZ41 740 aa14□□□□□ -0.17
VPS16-208ENST00000487461 MYOCDQ8IZQ8 938 aa14□□□□□ -0.17
VPS16-208ENST00000487461 IL27Q8NEV9 243 aa14□□□□□ -0.17
VPS16-208ENST00000487461 SEPT1Q8WYJ6 367 aa14□□□□□ -0.17
VPS16-208ENST00000487461 SEPT8Q92599 483 aa14□□□□□ -0.17
VPS16-208ENST00000487461 CDHR1Q96JP9 859 aa14□□□□□ -0.17
VPS16-208ENST00000487461 TCEANC2Q96MN5 208 aa14□□□□□ -0.17
VPS16-208ENST00000487461 NEK1Q96PY6 1258 aa14□□□□□ -0.17
VPS16-208ENST00000487461 JADE2Q9NQC1 790 aa14□□□□□ -0.17
VPS16-208ENST00000487461 LMCD1Q9NZU5 365 aa14□□□□□ -0.17
VPS16-208ENST00000487461 PKD2L1Q9P0L9 805 aa14□□□□□ -0.17
VPS16-208ENST00000487461 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
VPS16-208ENST00000487461 COG5Q9UP83 839 aa14□□□□□ -0.17
VPS16-208ENST00000487461 NCOR1O75376 2440 aa14□□□□□ -0.17
VPS16-208ENST00000487461 DOCK5Q9H7D0 1870 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 TRANK1O15050 2925 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 NRCAMQ92823 1304 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
VPS16-208ENST00000487461 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 CHRNA1P02708 482 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 FUT2Q10981 343 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 MTMR1Q13613 665 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 ADCK5Q3MIX3 580 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 TSGA10IPQ3SY00 556 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 WWC2Q6AWC2 1192 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 APOA5Q6Q788 366 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 RUFY4Q6ZNE9 571 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 DHX32Q7L7V1 743 aaKnown RBP13.99□□□□□ -0.17
VPS16-208ENST00000487461 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
VPS16-208ENST00000487461 HLA-CQ95604 372 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 TOP1MTQ969P6 601 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 C17orf80Q9BSJ5 609 aa13.99□□□□□ -0.17
VPS16-208ENST00000487461 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
VPS16-208ENST00000487461 TCF20Q9UGU0 1960 aaKnown RBP13.98□□□□□ -0.17
VPS16-208ENST00000487461 MAFGO15525 162 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 MARK3P27448 753 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 CENPQQ7L2Z9 268 aaPredicted RBP13.98□□□□□ -0.17
VPS16-208ENST00000487461 RPAINQ86UA6 219 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 CYP2W1Q8TAV3 490 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 PCYT2Q99447 389 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 RIC8AQ9NPQ8 531 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 FAM217BQ9NTX9 383 aaPredicted RBP13.98□□□□□ -0.17
VPS16-208ENST00000487461 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
VPS16-208ENST00000487461 REV3LO60673 3130 aa13.98□□□□□ -0.17
VPS16-208ENST00000487461 MUC3AQ02505 3323 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 CNTNAP5Q8WYK1 1306 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 UPP2O95045 317 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 PPFIA1Q13136 1202 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 GRIK4Q16099 956 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 MARCH8Q5T0T0 291 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 APBB2Q92870 758 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 GLG1Q92896 1179 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 PGBD1Q96JS3 809 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 MXRA8Q9BRK3 442 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 KCNH7Q9NS40 1196 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
VPS16-208ENST00000487461 ZBTB43O43298 467 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 ARP10275 920 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 CDC27P30260 824 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 NAPAP54920 295 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 MGAT3Q09327 533 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 RTN1Q16799 776 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 TAF2Q6P1X5 1199 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 DNAJB3Q8WWF6 145 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 ZBTB10Q96DT7 871 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 YME1L1Q96TA2 773 aa13.96□□□□□ -0.17
VPS16-208ENST00000487461 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
VPS16-208ENST00000487461 MBLAC1A4D2B0 266 aaPredicted RBP13.95□□□□□ -0.18
VPS16-208ENST00000487461 SMCO2A6NFE2 343 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 STXBP3O00186 592 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 GHRP10912 638 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 INSRRP14616 1297 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 IGBP1P78318 339 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 LPIN1Q14693 890 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 EPC2Q52LR7 807 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 JPH1Q9HDC5 661 aaPredicted RBP13.95□□□□□ -0.18
VPS16-208ENST00000487461 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 SLC9A2Q9UBY0 812 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 TUBE1Q9UJT0 475 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 MICAL3Q7RTP6 2002 aa13.95□□□□□ -0.18
VPS16-208ENST00000487461 XIRP2A4UGR9 3374 aa13.94□□□□□ -0.18
VPS16-208ENST00000487461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.94□□□□□ -0.18
VPS16-208ENST00000487461 KLF18A0A0U1RQI7 1052 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms