RNA–Protein interactions for RNA: ENST00000487121.1

MCFD2-216, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-216ENST00000487121 HAS3O00219 553 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
MCFD2-216ENST00000487121 KCNA2P16389 499 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 PDCP20941 246 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 GJB2P29033 226 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
MCFD2-216ENST00000487121 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
MCFD2-216ENST00000487121 GDF6Q6KF10 455 aaPredicted RBP17.08■□□□□ 0.32
MCFD2-216ENST00000487121 C16orf59Q7L2K0 433 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 NEK8Q86SG6 692 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 UIMC1Q96RL1 719 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 SDF4Q9BRK5 362 aa17.08■□□□□ 0.32
MCFD2-216ENST00000487121 IGLV3-22A0A075B6J6 115 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 FAM86B1E9PN63 330 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 RBAK-RBAKDNI3L0D1 243 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 F2P00734 622 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 LGALS2P05162 132 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 FAM86B2P0C5J1 330 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 PTPN11Q06124 597 aaPredicted RBP17.07■□□□□ 0.32
MCFD2-216ENST00000487121 HIC1Q14526 733 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 PTGISQ16647 500 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 Q4G0T1 1027 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 TMEM199Q8N511 208 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 C7orf31Q8N865 590 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 SCLYQ96I15 445 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 KATNAL1Q9BW62 490 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 SCN10AQ9Y5Y9 1956 aa17.07■□□□□ 0.32
MCFD2-216ENST00000487121 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 H3BRB1 525 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 PIK3AP1Q6ZUJ8 805 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 OXER1Q8TDS5 423 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 MBOAT7Q96N66 472 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 CTAGE1Q96RT6 745 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 WNT8AQ9H1J5 351 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
MCFD2-216ENST00000487121 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
MCFD2-216ENST00000487121 GTF2IRD1Q9UHL9 959 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 TCEAL9Q9UHQ7 104 aa17.06■□□□□ 0.32
MCFD2-216ENST00000487121 GSTTP1A0A1W2PQM5 241 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 IPO5O00410 1097 aaKnown RBP17.05■□□□□ 0.32
MCFD2-216ENST00000487121 TRAPPC10P48553 1259 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 NR5A1Q13285 461 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 ORC2Q13416 577 aaPredicted RBP17.05■□□□□ 0.32
MCFD2-216ENST00000487121 PPIGQ13427 754 aaKnown RBP eCLIP17.05■□□□□ 0.32
MCFD2-216ENST00000487121 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
MCFD2-216ENST00000487121 INF2Q27J81 1249 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 PRR16Q569H4 304 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 SESTD1Q86VW0 696 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.32
MCFD2-216ENST00000487121 ZNF577Q9BSK1 485 aa17.05■□□□□ 0.32
MCFD2-216ENST00000487121 JPH1Q9HDC5 661 aaPredicted RBP17.05■□□□□ 0.32
MCFD2-216ENST00000487121 H3BQV1 296 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 TBX3O15119 743 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.32
MCFD2-216ENST00000487121 TCF7P36402 384 aaPredicted RBP17.04■□□□□ 0.32
MCFD2-216ENST00000487121 LETM2Q2VYF4 491 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 TMEM240Q5SV17 173 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
MCFD2-216ENST00000487121 ZNF365Q70YC5 407 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 NOSTRINQ8IVI9 506 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 SEPT1Q8WYJ6 367 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
MCFD2-216ENST00000487121 RIT2Q99578 217 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 SLC9A2Q9UBY0 812 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 DDX25Q9UHL0 483 aaKnown RBP17.04■□□□□ 0.32
MCFD2-216ENST00000487121 LTBP2Q14767 1821 aa17.04■□□□□ 0.32
MCFD2-216ENST00000487121 RANBP2P49792 3224 aaKnown RBP17.04■□□□□ 0.32
MCFD2-216ENST00000487121 TRIOBPQ9H2D6 2365 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 EDIL3O43854 480 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 SMIM10L2AP0DMW4 78 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 SMIM10L2BP0DMW5 78 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 KRT76Q01546 638 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 ITGB3BPQ13352 177 aaPredicted RBP17.03■□□□□ 0.32
MCFD2-216ENST00000487121 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
MCFD2-216ENST00000487121 DEFB128Q7Z7B8 93 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 SMAP1Q8IYB5 467 aaPredicted RBP17.03■□□□□ 0.32
MCFD2-216ENST00000487121 RETREG2Q8NC44 543 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
MCFD2-216ENST00000487121 LENG9Q96B70 501 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 VWCEQ96DN2 955 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 FAM20AQ96MK3 541 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 IL23AQ9NPF7 189 aa17.03■□□□□ 0.32
MCFD2-216ENST00000487121 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
MCFD2-216ENST00000487121 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.32
MCFD2-216ENST00000487121 CCNT1O60563 726 aaKnown RBP17.02■□□□□ 0.32
MCFD2-216ENST00000487121 SLC34A2O95436 690 aa17.02■□□□□ 0.32
MCFD2-216ENST00000487121 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.32
MCFD2-216ENST00000487121 IQCF3P0C7M6 154 aa17.02■□□□□ 0.32
MCFD2-216ENST00000487121 MARK3P27448 753 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms