RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 NFRKBQ6P4R8 1299 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 TRIM50Q86XT4 487 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 FAM177A1Q8N128 213 aaPredicted RBP11.61□□□□□ -0.55
NEK4-204ENST00000487068 CCDC155Q8N6L0 562 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 FAM184AQ8NB25 1140 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 NSUN7Q8NE18 718 aaKnown RBP11.61□□□□□ -0.55
NEK4-204ENST00000487068 CYP2W1Q8TAV3 490 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 TBCKQ8TEA7 893 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 GLG1Q92896 1179 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 TBC1D32Q96NH3 1257 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 KIF2CQ99661 725 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 GPR20Q99678 358 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 SENP7Q9BQF6 1050 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 SH2B1Q9NRF2 756 aaPredicted RBP11.61□□□□□ -0.55
NEK4-204ENST00000487068 KCNH7Q9NS40 1196 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 SLC9A2Q9UBY0 812 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 MICAL3Q7RTP6 2002 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 FAM86B1E9PN63 330 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 KIAA0355O15063 1070 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 MAFGO15525 162 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 ATP9AO75110 1047 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 PPFIA4O75335 1185 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 FAM86B2P0C5J1 330 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 ARP10275 920 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 CYP2C9P11712 490 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 KRT2P35908 639 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 PTPN11Q06124 597 aaPredicted RBP11.6□□□□□ -0.55
NEK4-204ENST00000487068 PTGISQ16647 500 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 KRT25Q7Z3Z0 450 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 TMEM199Q8N511 208 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 SLC43A3Q8NBI5 491 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 DAGLBQ8NCG7 672 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 KAT2BQ92831 832 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 PHF20Q9BVI0 1012 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 AZI2Q9H6S1 392 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 GJB4Q9NTQ9 266 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 TBX21Q9UL17 535 aa11.6□□□□□ -0.55
NEK4-204ENST00000487068 TET1Q8NFU7 2136 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 H3BRB1 525 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 TIMP1P01033 207 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 CD4P01730 458 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 MARK3P27448 753 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 CYP2C18P33260 490 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 CCL23P55773 120 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 GUCY1B3Q02153 619 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
NEK4-204ENST00000487068 INF2Q27J81 1249 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 LETM2Q2VYF4 491 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 SEPT1Q8WYJ6 367 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 TUT1Q9H6E5 874 aaKnown RBP11.59□□□□□ -0.55
NEK4-204ENST00000487068 AGO4Q9HCK5 861 aaKnown RBP11.59□□□□□ -0.55
NEK4-204ENST00000487068 HDAC6Q9UBN7 1215 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 SAMM50Q9Y512 469 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 NFASCO94856 1347 aa11.59□□□□□ -0.55
NEK4-204ENST00000487068 PTPRSQ13332 1948 aa11.58□□□□□ -0.55
NEK4-204ENST00000487068 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.55
NEK4-204ENST00000487068 C17orf102A2RUQ5 167 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 IPO5O00410 1097 aaKnown RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 MEIS1O00470 390 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 BACH1O14867 736 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 MARCH6O60337 910 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 CYP3A4P08684 503 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 HOXD8P13378 290 aaPredicted RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 ITGB8P26012 769 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 ITGB3BPQ13352 177 aaPredicted RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEK4-204ENST00000487068 SAFBQ15424 915 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEK4-204ENST00000487068 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 MAFAQ8NHW3 353 aaPredicted RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 C8orf76Q96K31 380 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 CDX2Q99626 313 aaPredicted RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 C16orf70Q9BSU1 422 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
NEK4-204ENST00000487068 BACH2Q9BYV9 841 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 GTF2IRD1Q9UHL9 959 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 TELO2Q9Y4R8 837 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 UMODL1Q5DID0 1318 aa11.58□□□□□ -0.56
NEK4-204ENST00000487068 IGLV3-22A0A075B6J6 115 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 CHMP2AO43633 222 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 TDP2O95551 362 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 MMP1P03956 469 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 SMIM10L2AP0DMW4 78 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 SMIM10L2BP0DMW5 78 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 FDPSP14324 419 aaKnown RBP11.57□□□□□ -0.56
NEK4-204ENST00000487068 CSF2RAP15509 400 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 USP11P51784 963 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 ACTR2P61160 394 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 BFSP2Q13515 415 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 MFSD5Q6N075 450 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 NEK8Q86SG6 692 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms