RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ACTN1P12814 892 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 SELPP16109 830 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 PDCP20941 246 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 RFC2P35250 354 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 TRDNQ13061 729 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 USP17L6PQ6QN14 398 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 C7orf31Q8N865 590 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 NCOA7Q8NI08 942 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 PPTC7Q8NI37 304 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 AFAP1L1Q8TED9 768 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 EMID1Q96A84 441 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 SLC9A7Q96T83 725 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 LY9Q9HBG7 655 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 THEGQ9P2T0 379 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 SMC3Q9UQE7 1217 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 CACNA1GO43497 2377 aa10.77□□□□□ -0.69
TMEM39A-208ENST00000486159 COL4A4P53420 1690 aaPredicted RBP10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 PNMA6FA0A0J9YX94 578 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 TREHO43280 583 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 TLL1O43897 1013 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 CXCL10P02778 98 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 HOXD8P13378 290 aaPredicted RBP10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 GRB10Q13322 594 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 RALYLQ86SE5 291 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 TRIM50Q86XT4 487 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 ZNF654Q8IZM8 581 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 SRBD1Q8N5C6 995 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 GDPD5Q8WTR4 605 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 BBXQ8WY36 941 aaPredicted RBP10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 ATP6V1DQ9Y5K8 247 aa10.76□□□□□ -0.69
TMEM39A-208ENST00000486159 PRRC2BQ5JSZ5 2229 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 TNFRSF10AO00220 468 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 MEIS2O14770 477 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 PPFIA4O75335 1185 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 BAG4O95429 457 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 LGALS2P05162 132 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 BMP1P13497 986 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 CCND2P30279 289 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 THPOP40225 353 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 NT5C2P49902 561 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 EXOSC10Q01780 885 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 SP4Q02446 784 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 PTK7Q13308 1070 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 CNKSR3Q6P9H4 555 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 CCDC82Q8N4S0 544 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 DBF4BQ8NFT6 615 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 CAGE1Q8TC20 777 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 PHOSPHO2Q8TCD6 241 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 ATXN2LQ8WWM7 1075 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 ZBTB10Q96DT7 871 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 LLPHQ9BRT6 129 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 MAF1Q9H063 256 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 RNPEPQ9H4A4 650 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 MLXIPQ9HAP2 919 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 KIF3AQ9Y496 699 aa10.75□□□□□ -0.69
TMEM39A-208ENST00000486159 ERICH2A1L162 156 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 SPATA31C2B4DYI2 1134 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 SH2B2O14492 632 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 PRC1O43663 620 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 ATP9AO75110 1047 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 CTSHP09668 335 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 SMIM10L2AP0DMW4 78 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 SMIM10L2BP0DMW5 78 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 MCM5P33992 734 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 KCNJ6P48051 423 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 EVCP57679 992 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 MRPS5P82675 430 aaKnown RBP10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 FGD1P98174 961 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 RBL2Q08999 1139 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 TOB2Q14106 344 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 UBE2SQ16763 222 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 ME3Q16798 604 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 CATIPQ7Z7H3 387 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 ZNF274Q96GC6 653 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 GPR20Q99678 358 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 MTA3Q9BTC8 594 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 SETD4Q9NVD3 440 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 TPCN1Q9ULQ1 816 aa10.74□□□□□ -0.69
TMEM39A-208ENST00000486159 H3BRB1 525 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 TRAK2O60296 914 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 LGR5O75473 907 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 BAIAP3O94812 1187 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 CPA1P15085 419 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 Q6ZUG5 572 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 SERINC5Q86VE9 423 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 CCDC155Q8N6L0 562 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 ATP6V0A1Q93050 837 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms