RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 BICD2Q8TD16 824 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 KIF2CQ99661 725 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 RGS20O76081 388 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 SELPP16109 830 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 PTGS1P23219 599 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 LAMC2Q13753 1193 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 RABEP1Q15276 862 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 SKIV2LQ15477 1246 aaKnown RBP13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 PTGISQ16647 500 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 NLRX1Q86UT6 975 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 COPS5Q92905 334 aa13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
HLA-DOA-204ENST00000485901 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 ICAM3P32942 547 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 CLK2P49760 499 aaKnown RBP13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 NLRP5P59047 1200 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 DGKDQ16760 1214 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 NECAB1Q8N987 351 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 WASF1Q92558 559 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 GTF3C6Q969F1 213 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 ZSCAN31Q96LW9 406 aaPredicted RBP13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 RAD9AQ99638 391 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
HLA-DOA-204ENST00000485901 MAFGO15525 162 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 FIBPO43427 364 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 GPR37L1O60883 481 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 MMP3P08254 477 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 XBP1P17861 261 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 TFF2Q03403 129 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 PTK7Q13308 1070 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 NEDD9Q14511 834 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 CELF3Q5SZQ8 465 aaKnown RBP13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 JAKMIP3Q5VZ66 844 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 GALNT17Q6IS24 598 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 REXO1Q8N1G1 1221 aaKnown RBP13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 MICALL1Q8N3F8 863 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 ANO3Q9BYT9 981 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 BACH2Q9BYV9 841 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 MLXIPQ9HAP2 919 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
HLA-DOA-204ENST00000485901 EMSYQ7Z589 1322 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 PTPRSQ13332 1948 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 ST18O60284 1047 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 LPXNO60711 386 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 PPFIA4O75335 1185 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 GJB5O95377 273 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 LARGE1O95461 756 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 KCNQ1P51787 676 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 ERVK-21P61565 698 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 SP2Q02086 613 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 ARHGAP1Q07960 439 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 GRB10Q13322 594 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 IKBKEQ14164 716 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 AFG1LQ8WV93 481 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 SAMD11Q96NU1 681 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 UBIAD1Q9Y5Z9 338 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 SIP14410 1827 aa13.66□□□□□ -0.22
HLA-DOA-204ENST00000485901 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 MICAL3Q7RTP6 2002 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 HAS3O00219 553 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 GGPS1O95749 300 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 CKBP12277 381 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 ITGB5P18084 799 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 UBA1P22314 1058 aaKnown RBP13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 ZNF76P36508 570 aa13.65□□□□□ -0.22
HLA-DOA-204ENST00000485901 SREBF1P36956 1147 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms