RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 CRYGNQ8WXF5 182 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 UIMC1Q96RL1 719 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 ME3Q16798 604 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 NECAB1Q8N987 351 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 AFAP1L1Q8TED9 768 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 HERVK_113Q902F9 699 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 WNT8BQ93098 351 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 VWCEQ96DN2 955 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 RNPEPQ9H4A4 650 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 PCDHA4Q9UN74 947 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 NFASCO94856 1347 aa20.96■□□□□ 0.95
COL1A1-206ENST00000485870 IGLV3-22A0A075B6J6 115 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 DDX39AO00148 427 aaKnown RBP20.95■□□□□ 0.94
COL1A1-206ENST00000485870 CTDNEP1O95476 244 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 CKBP12277 381 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 SELPP16109 830 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 MARK3P27448 753 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 RFC2P35250 354 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 RASIP1Q5U651 963 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 FAM109BQ6ICB4 259 aaPredicted RBP20.95■□□□□ 0.94
COL1A1-206ENST00000485870 LRRC8DQ7L1W4 858 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 GLG1Q92896 1179 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 ATP6V0A1Q93050 837 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 MTIF3Q9H2K0 278 aaKnown RBP20.95■□□□□ 0.94
COL1A1-206ENST00000485870 SETD4Q9NVD3 440 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 CXXC1Q9P0U4 656 aaPredicted RBP20.95■□□□□ 0.94
COL1A1-206ENST00000485870 STK36Q9NRP7 1315 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 KAT6AQ92794 2004 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 TET1Q8NFU7 2136 aa20.95■□□□□ 0.94
COL1A1-206ENST00000485870 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-206ENST00000485870 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-206ENST00000485870 TREHO43280 583 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 PFKMP08237 780 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 HOXC8P31273 242 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 ACTR2P61160 394 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 RBL2Q08999 1139 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 TRIM71Q2Q1W2 868 aaKnown RBP20.94■□□□□ 0.94
COL1A1-206ENST00000485870 PRR16Q569H4 304 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 SERINC5Q86VE9 423 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 BLIDQ8IZY5 108 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 FTOQ9C0B1 505 aaKnown RBP eCLIP20.94■□□□□ 0.94
COL1A1-206ENST00000485870 KCNJ14Q9UNX9 436 aa20.94■□□□□ 0.94
COL1A1-206ENST00000485870 ZBBXA8MT70 800 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 GRXCR1A8MXD5 290 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 SETQ01105 290 aaPredicted RBP20.93■□□□□ 0.94
COL1A1-206ENST00000485870 LMBR1Q8WVP7 490 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 GTF3C6Q969F1 213 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 FAM161BQ96MY7 647 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 PCYT2Q99447 389 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 ZNF577Q9BSK1 485 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 SMARCAD1Q9H4L7 1026 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 ERAP1Q9NZ08 941 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 ORC3Q9UBD5 711 aaPredicted RBP20.93■□□□□ 0.94
COL1A1-206ENST00000485870 EMSYQ7Z589 1322 aa20.93■□□□□ 0.94
COL1A1-206ENST00000485870 IPO5O00410 1097 aaKnown RBP20.92■□□□□ 0.94
COL1A1-206ENST00000485870 LGR5O75473 907 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 GNAT1P11488 350 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 CIITAP33076 1130 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 NPY5RQ15761 445 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 ZNF618Q5T7W0 954 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 ZNF697Q5TEC3 545 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 FAM177A1Q8N128 213 aaPredicted RBP20.92■□□□□ 0.94
COL1A1-206ENST00000485870 DAGLBQ8NCG7 672 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 TBCKQ8TEA7 893 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 AZI2Q9H6S1 392 aa20.92■□□□□ 0.94
COL1A1-206ENST00000485870 CCNE2O96020 404 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 XBP1P17861 261 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 THPOP40225 353 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 PPFIA1Q13136 1202 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 GALNT17Q6IS24 598 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 PHF20Q9BVI0 1012 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 GJB4Q9NTQ9 266 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 MTMR10Q9NXD2 777 aa20.91■□□□□ 0.94
COL1A1-206ENST00000485870 NRCAMQ92823 1304 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 RBAK-RBAKDNI3L0D1 243 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 M0R2N6 131 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 DHX15O43143 795 aaKnown RBP20.9■□□□□ 0.94
COL1A1-206ENST00000485870 EDIL3O43854 480 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 ACTN1P12814 892 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 DNAJB2P25686 324 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 GPNMBQ14956 572 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 TRAF7Q6Q0C0 670 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 WASF1Q92558 559 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 C22orf23Q9BZE7 217 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 SLC4A7Q9Y6M7 1214 aa20.9■□□□□ 0.94
COL1A1-206ENST00000485870 BACH1O14867 736 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 NBNO60934 754 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 FDPSP14324 419 aaKnown RBP20.89■□□□□ 0.93
COL1A1-206ENST00000485870 PBX2P40425 430 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 STAT5BP51692 787 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 USP11P51784 963 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 IGBP1P78318 339 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 ADAM17P78536 824 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 GRIK4Q16099 956 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 NSUN7Q8NE18 718 aaKnown RBP20.89■□□□□ 0.93
COL1A1-206ENST00000485870 LENG9Q96B70 501 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 TBC1D22BQ9NU19 505 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 TRPC6Q9Y210 931 aa20.89■□□□□ 0.93
COL1A1-206ENST00000485870 RSPH10B2B2RC85 870 aa20.88■□□□□ 0.93
COL1A1-206ENST00000485870 JAK2O60674 1132 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms