RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.01	□□□□□ -0.49
TPRKB-208	ENST00000485758	GRIN2D	O15399	1336 aa		12.01	□□□□□ -0.49
TPRKB-208	ENST00000485758		M0R2N6	131 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	MAFG	O15525	162 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	SORBS3	O60504	671 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	JAK2	O60674	1132 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	PQBP1	O60828	265 aa	Known RBP	12	□□□□□ -0.49
TPRKB-208	ENST00000485758	CYP3A4	P08684	503 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	HOXD8	P13378	290 aa	Predicted RBP	12	□□□□□ -0.49
TPRKB-208	ENST00000485758	KCNA2	P16389	499 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	SYN1	P17600	705 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	PSMC6	P62333	389 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	ITGA7	Q13683	1181 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	DGKD	Q16760	1214 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	CEP55	Q53EZ4	464 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	METTL7B	Q6UX53	244 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	CYFIP1	Q7L576	1253 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	NIPA1	Q7RTP0	329 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	GIMAP8	Q8ND71	665 aa	Predicted RBP	12	□□□□□ -0.49
TPRKB-208	ENST00000485758	TOX2	Q96NM4	488 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	ALG1	Q9BT22	464 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	ZBED2	Q9BTP6	218 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	PHF20	Q9BVI0	1012 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	SEZ6L	Q9BYH1	1024 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	BCAS3	Q9H6U6	928 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	PDLIM7	Q9NR12	457 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	KCNJ14	Q9UNX9	436 aa		12	□□□□□ -0.49
TPRKB-208	ENST00000485758	TRIP12	Q14669	1992 aa	Predicted RBP	11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	KAT6A	Q92794	2004 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	DCDC2C	A8MYV0	355 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	MEIS1	O00470	390 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	ATP9A	O75110	1047 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	CLTB	P09497	229 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	ZNF76	P36508	570 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	FAAP100	Q0VG06	881 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	FAM126B	Q8IXS8	530 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	CYP2W1	Q8TAV3	490 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	LLPH	Q9BRT6	129 aa	Known RBP	11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	KCNH7	Q9NS40	1196 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	GJB4	Q9NTQ9	266 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	TANC1	Q9C0D5	1861 aa		11.99	□□□□□ -0.49
TPRKB-208	ENST00000485758	MYH9	P35579	1960 aa	Known RBP	11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	NFASC	O94856	1347 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	IGLV3-22	A0A075B6J6	115 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	FAM86B1	E9PN63	330 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	NOP56	O00567	594 aa	Known RBP	11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	TLR3	O15455	904 aa	Known RBP	11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	PPFIA4	O75335	1185 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	CD2BP2	O95400	341 aa	Known RBP	11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	F2	P00734	622 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	CD4	P01730	458 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	FAM86B2	P0C5J1	330 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	ZNF286B	P0CG31	522 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	AR	P10275	920 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	CIITA	P33076	1130 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	MCM2	P49736	904 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	NBPF20	Q3BBV1	942 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	KAT2B	Q92831	832 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	GPR20	Q99678	358 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	KATNAL1	Q9BW62	490 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	PKD2L1	Q9P0L9	805 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	PRKAG2	Q9UGJ0	569 aa		11.98	□□□□□ -0.49
TPRKB-208	ENST00000485758	TRIM43B	A6NCK2	446 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	HAS3	O00219	553 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	KIAA0355	O15063	1070 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	EDIL3	O43854	480 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	USP11	P51784	963 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	HMGN5	P82970	282 aa	Known RBP	11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	SET	Q01105	290 aa	Predicted RBP	11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	NFRKB	Q6P4R8	1299 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	KRT25	Q7Z3Z0	450 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	SH3RF1	Q7Z6J0	888 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	PLA2G4D	Q86XP0	818 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	TBCK	Q8TEA7	893 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	SDF4	Q9BRK5	362 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	AGO4	Q9HCK5	861 aa	Known RBP	11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	TBX21	Q9UL17	535 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	TELO2	Q9Y4R8	837 aa		11.97	□□□□□ -0.49
TPRKB-208	ENST00000485758	B4GALT4	O60513	344 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	MMP1	P03956	469 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	LGALS2	P05162	132 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	KRT2	P35908	639 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	SP4	Q02446	784 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	PTPN11	Q06124	597 aa	Predicted RBP	11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	ITGB3BP	Q13352	177 aa	Predicted RBP	11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	TRIM29	Q14134	588 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	MFSD10	Q14728	455 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	NONO	Q15233	471 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	KIAA0753	Q2KHM9	967 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	FAM47C	Q5HY64	1035 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	THSD4	Q6ZMP0	1018 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	SESTD1	Q86VW0	696 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	PPP1R13L	Q8WUF5	828 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	LENG9	Q96B70	501 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	TMX3	Q96JJ7	454 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	GDF15	Q99988	308 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	C16orf70	Q9BSU1	422 aa		11.96	□□□□□ -0.49
TPRKB-208	ENST00000485758	BRMS1	Q9HCU9	246 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms