RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 MEIS2O14770 477 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 CAVIN2O95810 425 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 TGFB3P10600 412 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 PSEN2P49810 448 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 PTGISQ16647 500 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 C7orf31Q8N865 590 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 KCNB2Q92953 911 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 ALG1Q9BT22 464 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 SEMA6BQ9H3T3 888 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 SNX14Q9Y5W7 946 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 TRIP12Q14669 1992 aaPredicted RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 STAM2O75886 525 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 MFSD10Q14728 455 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 UBE2SQ16763 222 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 OTOP2Q7RTS6 562 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 CREBRFQ8IUR6 639 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 TSC1Q92574 1164 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 KATNAL1Q9BW62 490 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 BCAS3Q9H6U6 928 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 PYCARDQ9ULZ3 195 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 STXBP5LQ9Y2K9 1186 aa12.15□□□□□ -0.46
DDX56-212ENST00000485367 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
DDX56-212ENST00000485367 TCHHQ07283 1943 aa12.15□□□□□ -0.47
DDX56-212ENST00000485367 SCN5AQ14524 2016 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 DOCK5Q9H7D0 1870 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 GRXCR1A8MXD5 290 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 SPATA31C2B4DYI2 1134 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 FIBPO43427 364 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 BFSP2Q13515 415 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 KIAA0753Q2KHM9 967 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 RASIP1Q5U651 963 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 PCNX4Q63HM2 1172 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 Q6ZUG5 572 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 DEFB128Q7Z7B8 93 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 INPP4AQ96PE3 977 aaPredicted RBP12.14□□□□□ -0.47
DDX56-212ENST00000485367 MTIF3Q9H2K0 278 aaKnown RBP12.14□□□□□ -0.47
DDX56-212ENST00000485367 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
DDX56-212ENST00000485367 HDAC6Q9UBN7 1215 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
DDX56-212ENST00000485367 SPDYE3A6NKU9 549 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 F2P00734 622 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 HOXD8P13378 290 aaPredicted RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 ICAM3P32942 547 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 SEMA3FQ13275 785 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 NEDD9Q14511 834 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 NLRX1Q86UT6 975 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 TM6SF1Q9BZW5 370 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 TTYH1Q9H313 450 aaPredicted RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 NEMFO60524 1076 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 DNAJB2P25686 324 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 AK2P54819 239 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 NAPAP54920 295 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 NCBP1Q09161 790 aaKnown RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 FUT2Q10981 343 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 CCDC155Q8N6L0 562 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 BRF1Q92994 677 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
DDX56-212ENST00000485367 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
DDX56-212ENST00000485367 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 HAS3O00219 553 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 RPS6KB1P23443 525 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■■□□ 17.4
DDX56-212ENST00000485367 PSMA5P28066 241 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 CDC27P30260 824 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 CDC25BP30305 580 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 RFC2P35250 354 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
DDX56-212ENST00000485367 PBX2P40425 430 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 METAP2P50579 478 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDX56-212ENST00000485367 SP4Q02446 784 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 METTL7BQ6UX53 244 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 VWCEQ96DN2 955 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 C16orf70Q9BSU1 422 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 FTOQ9C0B1 505 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDX56-212ENST00000485367 MTMR6Q9Y217 621 aa12.12□□□□□ -0.47
DDX56-212ENST00000485367 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms