RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 RBM43Q6ZSC3 357 aaKnown RBP19.58■□□□□ 0.72
CCDC78-214ENST00000485091 ZNF467Q7Z7K2 595 aaPredicted RBP19.58■□□□□ 0.72
CCDC78-214ENST00000485091 NT5C3AQ9H0P0 336 aa19.58■□□□□ 0.72
CCDC78-214ENST00000485091 KIAA1468Q9P260 1216 aa19.58■□□□□ 0.72
CCDC78-214ENST00000485091 DIS3Q9Y2L1 958 aaKnown RBP19.58■□□□□ 0.72
CCDC78-214ENST00000485091 E9PMD0 336 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 SLITRK3O94933 977 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 ARIH2O95376 493 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 UBA1P22314 1058 aaKnown RBP19.57■□□□□ 0.72
CCDC78-214ENST00000485091 KRT76Q01546 638 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 MCM6Q14566 821 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 HYIQ5T013 277 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 ISM2Q6H9L7 571 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 SASS6Q6UVJ0 657 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 LRSAM1Q6UWE0 723 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 BANK1Q8NDB2 785 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 TRIM47Q96LD4 638 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 MTRQ99707 1265 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 TINF2Q9BSI4 451 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 JPH1Q9HDC5 661 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-214ENST00000485091 BLOC1S4Q9NUP1 217 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 SLC9A2Q9UBY0 812 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 GJD2Q9UKL4 321 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 MCM3APO60318 1980 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 NFASCO94856 1347 aa19.57■□□□□ 0.72
CCDC78-214ENST00000485091 BIN1O00499 593 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 SSBP05455 408 aaKnown RBP eCLIP19.56■□□□□ 0.72
CCDC78-214ENST00000485091 RGS2P41220 211 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 SP3Q02447 781 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 MAP2K1Q02750 393 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-214ENST00000485091 CCL14Q16627 93 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 SH3RF1Q7Z6J0 888 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 RAD54LQ92698 747 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 HSD17B14Q9BPX1 270 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 POLR3CQ9BUI4 534 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-214ENST00000485091 ZSWIM8A7E2V4 1837 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 WDR64B1ANS9 1081 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 SNAI1O95863 264 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-214ENST00000485091 PSMC6P62333 389 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 TMEM63BQ5T3F8 832 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 MAMDC4Q6UXC1 1216 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 SOCS4Q8WXH5 440 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 LARP4BQ92615 738 aaKnown RBP19.56■□□□□ 0.72
CCDC78-214ENST00000485091 SENP7Q9BQF6 1050 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 CUEDC2Q9H467 287 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 TUFT1Q9NNX1 390 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 FLRT1Q9NZU1 646 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 PCDHA5Q9Y5H7 936 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 DOCK5Q9H7D0 1870 aa19.56■□□□□ 0.72
CCDC78-214ENST00000485091 DOCK3Q8IZD9 2030 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 ZNF236Q9UL36 1845 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 GGPS1O95749 300 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 TGFB3P10600 412 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 JAK3P52333 1124 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 CUL4BQ13620 913 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 ZNF746Q6NUN9 644 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-214ENST00000485091 SV2BQ7L1I2 683 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 ELOA2Q8IYF1 753 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-214ENST00000485091 USP6NLQ92738 828 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 LXNQ9BS40 222 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 MLXIPQ9HAP2 919 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 STK17AQ9UEE5 414 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 DDX41Q9UJV9 622 aaKnown RBP19.55■□□□□ 0.72
CCDC78-214ENST00000485091 GABRQQ9UN88 632 aa19.55■□□□□ 0.72
CCDC78-214ENST00000485091 SLC26A4O43511 780 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 TXNP10599 105 aaKnown RBP19.54■□□□□ 0.72
CCDC78-214ENST00000485091 PTGS1P23219 599 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 ACTR2P61160 394 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 TYRO3Q06418 890 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 NEDD9Q14511 834 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 TTLL4Q14679 1199 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 KIF22Q14807 665 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 PRAMEF19Q5SWL8 479 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 TAPT1Q6NXT6 567 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 TRMT1LQ7Z2T5 733 aaKnown RBP19.54■□□□□ 0.72
CCDC78-214ENST00000485091 GAS2L3Q86XJ1 694 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 PIGOQ8TEQ8 1089 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 COPS5Q92905 334 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 SMARCE1Q969G3 411 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 VTA1Q9NP79 307 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 KBTBD4Q9NVX7 518 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 WBP1LQ9NX94 342 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 WRAP73Q9P2S5 460 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-214ENST00000485091 ZHX1Q9UKY1 873 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-214ENST00000485091 DNM3Q9UQ16 869 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 P4HBP07237 508 aaKnown RBP19.54■□□□□ 0.72
CCDC78-214ENST00000485091 HOXC6P09630 235 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 CCDC192P0DO97 292 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 SFNP31947 248 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 CAP1Q01518 475 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 KCNV1Q6PIU1 500 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 GIMAP8Q8ND71 665 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-214ENST00000485091 APBA2Q99767 749 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 FUCA2Q9BTY2 467 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 TSPY26PQ9H489 355 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 PCDHA10Q9Y5I2 948 aa19.54■□□□□ 0.72
CCDC78-214ENST00000485091 MGAMO43451 1857 aa19.53■□□□□ 0.72
CCDC78-214ENST00000485091 SYNGAP1Q96PV0 1343 aa19.53■□□□□ 0.72
CCDC78-214ENST00000485091 ZBTB39O15060 712 aa19.53■□□□□ 0.72
CCDC78-214ENST00000485091 GTPBP6O43824 516 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms