RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CHADLQ6NUI6 762 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 EIF1ADQ8N9N8 165 aaKnown RBP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 TAF4BQ92750 862 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 DDX47Q9H0S4 455 aaKnown RBP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 VAT1LQ9HCJ6 419 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 C6orf50Q9HD87 102 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 C21orf2O43822 256 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 NEDD9Q14511 834 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 CALCRLQ16602 461 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 PARP9Q8IXQ6 854 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 MYOCDQ8IZQ8 938 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 CDK5RAP3Q96JB5 506 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 ACTR5Q9H9F9 607 aaPredicted RBP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 AIPL1Q9NZN9 384 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 NOVA2Q9UNW9 492 aaKnown RBP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 CCDC88AQ3V6T2 1871 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 GOLGA6L7A0A1B0GV03 622 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 ITGA4P13612 1032 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 USP11P51784 963 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 PPP2R2AP63151 447 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 PROM2Q8N271 834 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 UBLCP1Q8WVY7 318 aaPredicted RBP21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 DNAJC19Q96DA6 116 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 TBC1D7Q9P0N9 293 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 C5orf60A6NFR6 353 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 PHF20L1A8MW92 1017 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 TDP2O95551 362 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 FXR2P51116 673 aaKnown RBP eCLIP21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 BIRC3Q13489 604 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 ODF2Q5BJF6 829 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 USP17L2Q6R6M4 530 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 TRIM59Q8IWR1 403 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 LRRC57Q8N9N7 239 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 LRRC45Q96CN5 670 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
RPUSD3-216ENST00000484134 DAPK3O43293 454 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 GNA11P29992 359 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 SCTRP47872 440 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 CDR1P51861 262 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 PTK2Q05397 1052 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 COASYQ13057 564 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 C3orf20Q8ND61 904 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 ACTRT1Q8TDG2 376 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 GANQ9H2C0 597 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 TPX2Q9ULW0 747 aaKnown RBP21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 CEP83Q9Y592 693 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 CES2O00748 559 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 ATP2C2O75185 946 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 METTL13Q8N6R0 699 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 GIMAP7Q8NHV1 300 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 SNX29Q8TEQ0 813 aa21.64■■□□□ 1.05
RPUSD3-216ENST00000484134 MYH7BA7E2Y1 1941 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 OPLAHO14841 1288 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 ELF1P32519 619 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 MAGOHP61326 146 aaKnown RBP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 PSMD2Q13200 908 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 SNCBQ16143 134 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 ASIC2Q16515 512 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 ZNF571Q7Z3V5 609 aaPredicted RBP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 CEP57Q86XR8 500 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 NELFCDQ8IXH7 590 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 SH3RF3Q8TEJ3 882 aaPredicted RBP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 TATDN2Q93075 761 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 MAGOHBQ96A72 148 aaKnown RBP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 PIGSQ96S52 555 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 AMACRQ9UHK6 382 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 PAEPP09466 180 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 ACTN1P12814 892 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 HIBADHP31937 336 aaKnown RBP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 RUFY4Q6ZNE9 571 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 IRF2BP2Q7Z5L9 587 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 TXNRD3Q86VQ6 643 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 REXO1Q8N1G1 1221 aaKnown RBP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 GJA10Q969M2 543 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 SGSM3Q96HU1 749 aa21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.63■■□□□ 1.05
RPUSD3-216ENST00000484134 TMEM119Q4V9L6 283 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 AGBL2Q5U5Z8 902 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 FOXR2Q6PJQ5 311 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 ZNF444Q8N0Y2 327 aaPredicted RBP21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 MDM1Q8TC05 714 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 PBKQ96KB5 322 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 LZTS2Q9BRK4 669 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 ODF2LQ9ULJ1 636 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 NOC2LQ9Y3T9 749 aaKnown RBP21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 LAMB2P55268 1798 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 F8W031 263 aaPredicted RBP21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 RASA1P20936 1047 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 DPY19L2P1Q6NXN4 242 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 TMC3Q7Z5M5 1100 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 CACNA2D3Q8IZS8 1091 aa21.62■■□□□ 1.05
RPUSD3-216ENST00000484134 BTNL10A8MVZ5 291 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 DRD4P21917 467 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 SF3B3Q15393 1217 aaKnown RBP21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 LACTB2Q53H82 288 aaPredicted RBP21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 SOGA3Q5TF21 947 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 CCT6BQ92526 530 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 N4BP2L2Q92802 583 aaPredicted RBP21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 TACO1Q9BSH4 297 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms