RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 MMEP08473 750 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 RXRBP28702 533 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 UBA7P41226 1012 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 RWDD2BP57060 319 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 NCALDP61601 193 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ASIC1P78348 528 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 MTMR3Q13615 1198 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ITIH4Q14624 930 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 DTHD1Q6ZMT9 781 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 TRPM8Q7Z2W7 1104 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ZCRB1Q8TBF4 217 aaKnown RBP12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CENPTQ96BT3 561 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CNOT10Q9H9A5 744 aaKnown RBP12.93□□□□□ -0.34
VTI1A-205ENST00000483122 PCDH11XQ9BZA7 1347 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 PCDH11YQ9BZA8 1340 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 A0A0G2JS52 829 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 ASAP2O43150 1006 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 CEP104O60308 925 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 UBOX5O94941 541 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 PECAM1P16284 738 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 DHX9Q08211 1270 aaKnown RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 TROAPQ12815 778 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 BLMHQ13867 455 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 DDB1Q16531 1140 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 TAF4BQ92750 862 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 SELENOSQ9BQE4 189 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 TRIM9Q9C026 710 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 GREM2Q9H772 168 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 MYH4Q9Y623 1939 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 RARAP10276 462 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 PLCG1P19174 1290 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 RAB27AP51159 221 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 KCNMA1Q12791 1236 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 SLMAPQ14BN4 828 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 RBBP5Q15291 538 aaKnown RBP12.92□□□□□ -0.34
VTI1A-205ENST00000483122 MAN2A1Q16706 1144 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 ESR2Q92731 530 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 ARHGEF10LQ9HCE6 1279 aa12.92□□□□□ -0.34
VTI1A-205ENST00000483122 A6NHS1 94 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 SNAP23O00161 211 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 IGF2BP3O00425 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
VTI1A-205ENST00000483122 MYL1P05976 194 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 RPS6KA1Q15418 735 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 DPH5Q9H2P9 285 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 ADAM7Q9H2U9 754 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 AMACRQ9UHK6 382 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 KIF4AO95239 1232 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 SHBGP04278 402 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 SCG2P13521 617 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 ITGA4P13612 1032 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 CCND1P24385 295 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
VTI1A-205ENST00000483122 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 MAEAQ7L5Y9 396 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 KIF2BQ8N4N8 673 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
VTI1A-205ENST00000483122 CELF4Q9BZC1 486 aaKnown RBP12.91□□□□□ -0.34
VTI1A-205ENST00000483122 ECT2Q9H8V3 914 aa12.91□□□□□ -0.34
VTI1A-205ENST00000483122 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
VTI1A-205ENST00000483122 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-205ENST00000483122 BRWD3Q6RI45 1802 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 A0A087X0T9 212 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 CYP2D7A0A087X1C5 515 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 TTI1O43156 1089 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 PDE8BO95263 885 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 KRT16P08779 473 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 FAM228BP0C875 321 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 RASGRF1Q13972 1273 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 CCDC84Q86UT8 332 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-205ENST00000483122 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 KCNV2Q8TDN2 545 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 NLRP3Q96P20 1036 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 ATP8A1Q9Y2Q0 1164 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-205ENST00000483122 SERPING1P05155 500 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 ARID5AQ03989 594 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
VTI1A-205ENST00000483122 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms