RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 BROXQ5VW32 411 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 TDRD10Q5VZ19 366 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 SLC6A19Q695T7 634 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 OVCH2Q7RTZ1 564 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 LYSMD3Q7Z3D4 306 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PDZD3Q86UT5 571 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 SNX32Q86XE0 403 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 C7orf61Q8IZ16 206 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 ARHGEF39Q8N4T4 335 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 GPBAR1Q8TDU6 330 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 BRI3BPQ8WY22 251 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 LRTOMTQ8WZ04 291 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 KLRG1Q96E93 195 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 MVB12AQ96EY5 273 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 RSRC1Q96IZ7 334 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 CORO1BQ9BR76 489 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 MRPL9Q9BYD2 267 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 ZCCHC2Q9C0B9 1178 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 TSPY26PQ9H489 355 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 UBN1Q9NPG3 1134 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PICK1Q9NRD5 415 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 FNIP2Q9P278 1114 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 CFDP1Q9UEE9 299 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 KCNG1Q9UIX4 513 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 RRP7AQ9Y3A4 280 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 CEP83Q9Y592 693 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA9Q9Y5G4 932 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA8Q9Y5G5 932 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA7Q9Y5G6 932 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA6Q9Y5G7 932 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA3Q9Y5H0 932 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA2Q9Y5H1 932 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 CCDC196A0A1B0GTZ2 297 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 CHURC1-FNTBB4DL54 471 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 H7C1D1 291 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 TOR1BO14657 336 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 TIPRLO75663 272 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 KCNH1O95259 989 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 CD4P01730 458 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 TGFB3P10600 412 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 ATP2A2P16615 1042 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MX2P20592 715 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 CD247P20963 164 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 ABCB4P21439 1286 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 GRK4P32298 578 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 UBA7P41226 1012 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 ARL4DP49703 201 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MMP14P50281 582 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MAPK10P53779 464 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 SLC16A1P53985 500 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 RNF4P78317 190 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 ST5P78524 1137 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 GPLD1P80108 840 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 POU4F2Q12837 409 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 PAK1Q13153 545 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 GRM1Q13255 1194 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 IKBKEQ14164 716 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 HSF5Q4G112 596 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 TMEM177Q53S58 311 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 NOL9Q5SY16 702 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 LRFN4Q6PJG9 635 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 NEK10Q6ZWH5 1172 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 CYFIP1Q7L576 1253 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MCATQ8IVS2 390 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 KIAA0319LQ8IZA0 1049 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 PHKBQ93100 1093 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 CCDC47Q96A33 483 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 TMEM169Q96HH4 297 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MKRN2Q9H000 416 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 RASSF4Q9H2L5 321 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 NKX2-4Q9H2Z4 354 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 SOX17Q9H6I2 414 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 BRD9Q9H8M2 597 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 VTA1Q9NP79 307 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 TRIM33Q9UPN9 1127 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 POLHQ9Y253 713 aa5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 MAGED1Q9Y5V3 778 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-216ENST00000483065 PTPDC1A2A3K4 754 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 BLACEA4D250 179 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 A6NNZ2 444 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 WDR64B1ANS9 1081 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 B4E171 279 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ARVCFO00192 962 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 EIF3FO00303 357 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 FFAR2O15552 330 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 MAN1A2O60476 641 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 DKC1O60832 514 aaKnown RBP eCLIP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ALDH1A1P00352 501 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 SOD2P04179 222 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 THP07101 528 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 ESRRAP11474 423 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 MTHFD2P13995 350 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 PRIM2P49643 509 aa5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 WDR4P57081 412 aaKnown RBP5.9□□□□□ -1.46
R3HDM1-216ENST00000483065 NTRK3Q16288 839 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms