RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PGM5Q15124 567 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 PTPN21Q16825 1174 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ASPRV1Q53RT3 343 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ASCL5Q7RTU5 278 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ERMP1Q7Z2K6 904 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 RBM23Q86U06 439 aaKnown RBP17.39■□□□□ 0.37
HDAC6-224ENST00000481929 VSIG10LQ86VR7 867 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 DGKHQ86XP1 1220 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 SPPL3Q8TCT6 385 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 HELLSQ9NRZ9 838 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ZMYM6O95789 1325 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 MYH6P13533 1939 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ENPP3O14638 875 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 GALR2O43603 387 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-224ENST00000481929 DGKIO75912 1065 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 CHRNA1P02708 482 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 ATF7P17544 494 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-224ENST00000481929 CCND2P30279 289 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 GHRHRQ02643 423 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 ZBTB33Q86T24 672 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 CMTR2Q8IYT2 770 aaKnown RBP17.38■□□□□ 0.37
HDAC6-224ENST00000481929 IL31RAQ8NI17 732 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 POF1BQ8WVV4 589 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 ESR2Q92731 530 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.372e-6■■□□□ 12.7
HDAC6-224ENST00000481929 AMNQ9BXJ7 453 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-224ENST00000481929 KAT14Q9H8E8 782 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 VAT1LQ9HCJ6 419 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 MAP3K20Q9NYL2 800 aaKnown RBP17.38■□□□□ 0.37
HDAC6-224ENST00000481929 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-224ENST00000481929 TTC3P53804 2025 aa17.38■□□□□ 0.37
HDAC6-224ENST00000481929 PRR23AA6NEV1 266 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 OPLAHO14841 1288 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 ADAM17P78536 824 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 LPIN1Q14693 890 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 KLHL23Q8NBE8 558 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 OTUD7AQ8TE49 926 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-224ENST00000481929 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 EHMT1Q9H9B1 1298 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 TRPC6Q9Y210 931 aa17.37■□□□□ 0.37
HDAC6-224ENST00000481929 MX1P20591 662 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-224ENST00000481929 CCDC178Q5BJE1 867 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 RSPH3Q86UC2 560 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 TRIM50Q86XT4 487 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 TBC1D10CQ8IV04 446 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-224ENST00000481929 RIPOR3Q96MK2 946 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 TLE6Q9H808 572 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 GVINP1Q7Z2Y8 2422 aa17.36■□□□□ 0.37
HDAC6-224ENST00000481929 FSD2A1L4K1 749 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 PDGFBP01127 241 aaPredicted RBP17.35■□□□□ 0.37
HDAC6-224ENST00000481929 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
HDAC6-224ENST00000481929 NBL1P41271 181 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 NEDD9Q14511 834 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 GNPTABQ3T906 1256 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 METTL7BQ6UX53 244 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 SAMD3Q8N6K7 520 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 SUSD6Q92537 303 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 GPR20Q99678 358 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 BCAS3Q9H6U6 928 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
HDAC6-224ENST00000481929 NEDD4P46934 1319 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 NRCAMQ92823 1304 aa17.35■□□□□ 0.37
HDAC6-224ENST00000481929 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 ID4P47928 161 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 MGAT3Q09327 533 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 MCMDC2Q4G0Z9 681 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 PAN2Q504Q3 1202 aaKnown RBP17.34■□□□□ 0.37
HDAC6-224ENST00000481929 UTP14CQ5TAP6 766 aaKnown RBP17.34■□□□□ 0.37
HDAC6-224ENST00000481929 RUFY4Q6ZNE9 571 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 TSHZ1Q6ZSZ6 1077 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 NPAS4Q8IUM7 802 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 MICAL1Q8TDZ2 1067 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 PCDHGC5Q9Y5F6 944 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 MYO15AQ9UKN7 3530 aa17.34■□□□□ 0.37
HDAC6-224ENST00000481929 KIAA1671Q9BY89 1806 aa17.33■□□□□ 0.37
HDAC6-224ENST00000481929 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 STAG3L1P0CL83 205 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 NT5C2P49902 561 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 FBXO47Q5MNV8 452 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 FAM227BQ96M60 508 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 NEK1Q96PY6 1258 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 CDCA3Q99618 268 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-224ENST00000481929 PCDHA1Q9Y5I3 950 aa17.33■□□□□ 0.36
HDAC6-224ENST00000481929 KAT6AQ92794 2004 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 PER2O15055 1255 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 SRGAP2BP0DMP2 458 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 C20orf194Q5TEA3 1177 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 FCHSD1Q86WN1 690 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 ATP8B4Q8TF62 1192 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms