RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DDX39AO00148 427 aaKnown RBP22.3■■□□□ 1.16
LIME1-205ENST00000480139 HAS3O00219 553 aa22.3■■□□□ 1.16
LIME1-205ENST00000480139 LGR5O75473 907 aa22.3■■□□□ 1.16
LIME1-205ENST00000480139 BAG4O95429 457 aaKnown RBP22.3■■□□□ 1.16
LIME1-205ENST00000480139 ZNF286BP0CG31 522 aa22.3■■□□□ 1.16
LIME1-205ENST00000480139 MROH7Q68CQ1 1323 aa22.3■■□□□ 1.16
LIME1-205ENST00000480139 IGKV6D-21A0A0A0MT36 114 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 ARVCFO00192 962 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 SFNP31947 248 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 MCM7P33993 719 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 CDK7P50613 346 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 ATN1P54259 1190 aaPredicted RBP22.29■■□□□ 1.16
LIME1-205ENST00000480139 ITGA7Q13683 1181 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 CALCRLQ16602 461 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 LRRC26Q2I0M4 334 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 NFRKBQ6P4R8 1299 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 ABHD15Q6UXT9 468 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 RDM1Q8NG50 284 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 VTI1AQ96AJ9 217 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 MTMR9Q96QG7 549 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 ZNF215Q9UL58 517 aaPredicted RBP22.29■■□□□ 1.16
LIME1-205ENST00000480139 WDR81Q562E7 1941 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 GRIN2DO15399 1336 aa22.29■■□□□ 1.16
LIME1-205ENST00000480139 MKI67P46013 3256 aaKnown RBP22.28■■□□□ 1.16
LIME1-205ENST00000480139 WDR64B1ANS9 1081 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 H3BRB1 525 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 SUPT20HL2P0C7V6 817 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 ATP2B1P20020 1258 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 PSEN2P49810 448 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 JAK3P52333 1124 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 PSMC6P62333 389 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 PTPN11Q06124 597 aaPredicted RBP22.28■■□□□ 1.16
LIME1-205ENST00000480139 RESTQ13127 1097 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 PPP2R5CQ13362 524 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 MIS18BP1Q6P0N0 1132 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 ANKRD33Q7Z3H0 272 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 SESTD1Q86VW0 696 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 SPRYD3Q8NCJ5 442 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 UIMC1Q96RL1 719 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 SMARCAD1Q9H4L7 1026 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 ZSCAN16Q9H4T2 348 aaPredicted RBP22.28■■□□□ 1.16
LIME1-205ENST00000480139 TUT1Q9H6E5 874 aaKnown RBP22.28■■□□□ 1.16
LIME1-205ENST00000480139 VAV3Q9UKW4 847 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 PCDHA10Q9Y5I2 948 aa22.28■■□□□ 1.16
LIME1-205ENST00000480139 MARCH6O60337 910 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 RTP1P59025 263 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 MFSD10Q14728 455 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 ZNF174Q15697 407 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 NBPF20Q3BBV1 942 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 PLPPR4Q7Z2D5 763 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 FERMT3Q86UX7 667 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 AFAP1L1Q8TED9 768 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 GJA10Q969M2 543 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 TOX2Q96NM4 488 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 UNC45AQ9H3U1 944 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 AZI2Q9H6S1 392 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.27■■□□□ 1.16
LIME1-205ENST00000480139 ERAP1Q9NZ08 941 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 PCDHB6Q9Y5E3 794 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 MYH15Q9Y2K3 1946 aa22.27■■□□□ 1.16
LIME1-205ENST00000480139 LAD1O00515 517 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 PSAPP07602 524 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 SLC26A2P50443 739 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 KIAA0753Q2KHM9 967 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 UTP14CQ5TAP6 766 aaKnown RBP22.26■■□□□ 1.15
LIME1-205ENST00000480139 TRIM50Q86XT4 487 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 PCYT2Q99447 389 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 TMEM60Q9H2L4 133 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 DISC1Q9NRI5 854 aa22.26■■□□□ 1.15
LIME1-205ENST00000480139 OR52Z1P0C646 297 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 MLLT1Q03111 559 aaPredicted RBP22.25■■□□□ 1.15
LIME1-205ENST00000480139 SPIRE1Q08AE8 756 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 NBR1Q14596 966 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 TRIM60Q495X7 471 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 FAM160B1Q5W0V3 765 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 C4orf32Q8N8J7 132 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 GLG1Q92896 1179 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 PCDHA12Q9UN75 941 aa22.25■■□□□ 1.15
LIME1-205ENST00000480139 MYH9P35579 1960 aaKnown RBP22.25■■□□□ 1.15
LIME1-205ENST00000480139 CHMP2AO43633 222 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 ZSCAN22P10073 491 aaPredicted RBP22.24■■□□□ 1.15
LIME1-205ENST00000480139 STAT5BP51692 787 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 MIER3Q7Z3K6 550 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 CCDC60Q8IWA6 550 aaPredicted RBP22.24■■□□□ 1.15
LIME1-205ENST00000480139 FAM126BQ8IXS8 530 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 TTC12Q9H892 705 aaPredicted RBP22.24■■□□□ 1.15
LIME1-205ENST00000480139 ZNF302Q9NR11 478 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 ATP11BQ9Y2G3 1177 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 SAMM50Q9Y512 469 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 MAFBQ9Y5Q3 323 aaPredicted RBP22.24■■□□□ 1.15
LIME1-205ENST00000480139 IGSF9BQ9UPX0 1349 aa22.24■■□□□ 1.15
LIME1-205ENST00000480139 DNAH12Q6ZR08 3092 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 BACH1O14867 736 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 EVI5O60447 810 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 BMP15O95972 392 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 HOXC8P31273 242 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 ANP32AP39687 249 aaKnown RBP22.23■■□□□ 1.15
LIME1-205ENST00000480139 PRPHP41219 470 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 TLE2Q04725 743 aa22.23■■□□□ 1.15
LIME1-205ENST00000480139 PTGDRQ13258 359 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms