RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 PRAMEF18Q5VWM3 479 aa7.89□□□□□ -1.15
COMMD3-212ENST00000479958 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
COMMD3-212ENST00000479958 ZNF761Q86XN6 746 aaPredicted RBP7.89□□□□□ -1.15
COMMD3-212ENST00000479958 UHMK1Q8TAS1 419 aaKnown RBP7.89□□□□□ -1.15
COMMD3-212ENST00000479958 TRAF6Q9Y4K3 522 aa7.89□□□□□ -1.15
COMMD3-212ENST00000479958 TARBP1Q13395 1621 aaKnown RBP7.89□□□□□ -1.15
COMMD3-212ENST00000479958 CARMIL1Q5VZK9 1371 aa7.89□□□□□ -1.15
COMMD3-212ENST00000479958 WDR97A6NE52 1622 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 DDX3XO00571 662 aaKnown RBP eCLIP7.88□□□□□ -1.153e-20■■□□□ 14.4
COMMD3-212ENST00000479958 TUSC3Q13454 348 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 RGL3Q3MIN7 710 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 EP400NLQ6ZTU2 488 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 PMFBP1Q8TBY8 1022 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 CLEC4DQ8WXI8 215 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 ADAM7Q9H2U9 754 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 IPPKQ9H8X2 491 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 NCANO14594 1321 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 ASXL2Q76L83 1435 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 WDR62O43379 1518 aa7.88□□□□□ -1.15
COMMD3-212ENST00000479958 CCDC163A0A0D9SF12 145 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 CELA3BP08861 270 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 GUCY1A3Q02108 690 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 GRIN1Q05586 938 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 ADAM9Q13443 819 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 MCTP2Q6DN12 878 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 NLGN4XQ8N0W4 816 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
COMMD3-212ENST00000479958 L2HGDHQ9H9P8 463 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 SNTG2Q9NY99 539 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 AQRO60306 1485 aaKnown RBP eCLIP7.87□□□□□ -1.156e-7■■■■□ 24.7
COMMD3-212ENST00000479958 ERICH3Q5RHP9 1530 aa7.87□□□□□ -1.15
COMMD3-212ENST00000479958 THOC2Q8NI27 1593 aaKnown RBP7.87□□□□□ -1.15
COMMD3-212ENST00000479958 MROH6A6NGR9 719 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 CYP1A1P04798 512 aaPredicted RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 IL13P35225 146 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 RASA3Q14644 834 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 PAN2Q504Q3 1202 aaKnown RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 PRR31Q5SQ13 230 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 FOXB2Q5VYV0 432 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 VASNQ6EMK4 673 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 BORAQ6PGQ7 559 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 DDX1Q92499 740 aaKnown RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 FBXW5Q969U6 566 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 LCORQ96JN0 433 aaPredicted RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 DNAJC7Q99615 494 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 LNPKQ9C0E8 428 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 CATSPERZQ9NTU4 200 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 CROTQ9UKG9 612 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 ZNF608Q9ULD9 1512 aaPredicted RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 GAPVD1Q14C86 1478 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 FAM221BA6H8Z2 402 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 NKRFO15226 690 aaKnown RBP eCLIP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 FAHP16930 419 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 ST5P78524 1137 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 PLP2Q04941 152 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 HABP4Q5JVS0 413 aaKnown RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 TXNDC5Q8NBS9 432 aaKnown RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 SREK1Q8WXA9 508 aaKnown RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 MRPS23Q9Y3D9 190 aaKnown RBP7.86□□□□□ -1.15
COMMD3-212ENST00000479958 PCDHA8Q9Y5H6 950 aa7.86□□□□□ -1.15
COMMD3-212ENST00000479958 CLIP1P30622 1438 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 ABCA5Q8WWZ7 1642 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 EFCAB14O75071 495 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 ENO2P09104 434 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-212ENST00000479958 FAM47CQ5HY64 1035 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 TMC5Q6UXY8 1006 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 KCTD1Q719H9 257 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 C16orf59Q7L2K0 433 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 FERMT3Q86UX7 667 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 RBM12BQ8IXT5 1001 aaKnown RBP7.85□□□□□ -1.15
COMMD3-212ENST00000479958 LGI4Q8N135 537 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 ZSWIM2Q8NEG5 633 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 EXOC2Q96KP1 924 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 TMEM168Q9H0V1 697 aa7.85□□□□□ -1.15
COMMD3-212ENST00000479958 CNR2P34972 360 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 EPHA5P54756 1037 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 RTP5Q14D33 572 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 ZSWIM3Q96MP5 696 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 PCGF6Q9BYE7 350 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 FTSJ1Q9UET6 329 aa7.84□□□□□ -1.15
COMMD3-212ENST00000479958 WNT9AO14904 365 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 PRICKLE3O43900 615 aaPredicted RBP7.83□□□□□ -1.16
COMMD3-212ENST00000479958 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
COMMD3-212ENST00000479958 ZNF28P17035 718 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 GPR19Q15760 415 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 NFE2L2Q16236 605 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 CRY1Q16526 586 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 ARHGAP36Q6ZRI8 547 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 ZC3H7AQ8IWR0 971 aaKnown RBP7.83□□□□□ -1.16
COMMD3-212ENST00000479958 PCDH19Q8TAB3 1148 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 THAP3Q8WTV1 239 aaPredicted RBP7.83□□□□□ -1.16
COMMD3-212ENST00000479958 BDH2Q9BUT1 245 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 PCDHA9Q9Y5H5 950 aa7.83□□□□□ -1.16
COMMD3-212ENST00000479958 FBXO21O94952 628 aa7.82□□□□□ -1.16
COMMD3-212ENST00000479958 LTFP02788 710 aa7.82□□□□□ -1.16
COMMD3-212ENST00000479958 CKMP06732 381 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms