RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.87
TTC3-216ENST00000479930 AKAP4Q5JQC9 854 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 CAPN11Q9UMQ6 739 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 LRCH1Q9Y2L9 728 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 THAP12O43422 761 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 HMBSP08397 361 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 HPCAP84074 193 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 VSIG1Q86XK7 387 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 FAR1Q8WVX9 515 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 CCDC3Q9BQI4 270 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 TADA3O75528 432 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 AP1B1Q10567 949 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 CCDC144BQ3MJ40 725 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 IYDQ6PHW0 289 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 LRRC31Q6UY01 552 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 TRIM69Q86WT6 500 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 ARHGEF3Q9NR81 526 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 NUDT14O95848 222 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 MYO1EQ12965 1108 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 DEPDC7Q96QD5 511 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 AAASQ9NRG9 546 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 OTOL1A6NHN0 477 aaPredicted RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 LUC7L3O95232 432 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 NFICP08651 508 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 ADKP55263 362 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 MFN1Q8IWA4 741 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 HEXIM2Q96MH2 286 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 EPN3Q9H201 632 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 DBF4Q9UBU7 674 aaPredicted RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 E2F6O75461 281 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 RASGRP1O95267 797 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 USP14P54578 494 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 OR6B2Q6IFH4 312 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 MARK2Q7KZI7 788 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 KLC2Q9H0B6 622 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 MARK1Q9P0L2 795 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 TLK1Q9UKI8 766 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 CTNND2Q9UQB3 1225 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 GNAT2P19087 354 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 GGCXP38435 758 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 SARSP49591 514 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 ARHGEF7Q14155 803 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 USP39Q53GS9 565 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 C11orf88Q6PI97 169 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 EFHBQ8N7U6 833 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 ATP6V1C2Q8NEY4 427 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 CA4P22748 312 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 MIGA2Q7L4E1 593 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 FATE1Q969F0 183 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 C1orf112Q9NSG2 853 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 RSPH14Q9UHP6 348 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 PTPN1P18031 435 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 NTSP30990 170 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 TAF13Q15543 124 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 TSNAXIP1Q2TAA8 658 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 SPON1Q9HCB6 807 aa9.64□□□□□ -0.87
TTC3-216ENST00000479930 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
TTC3-216ENST00000479930 TNFRSF8P28908 595 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 ASZ1Q8WWH4 475 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 YME1L1Q96TA2 773 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 TRIM54Q9BYV2 358 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 PCDHGB4Q9UN71 923 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 TNFSF13BQ9Y275 285 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 NPHP3Q7Z494 1330 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 ACTN4O43707 911 aaKnown RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 CMTR1Q8N1G2 835 aaKnown RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 STRIP2Q9ULQ0 834 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 UBA6A0AVT1 1052 aaPredicted RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 GOLGA8SH3BPF8 625 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SEMA3EO15041 775 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 HSPA6P17066 643 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 RCN1Q15293 331 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SH3BP5LQ7L8J4 393 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 STAG1Q8WVM7 1258 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SP110Q9HB58 689 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 KRT86O43790 486 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 BRAFP15056 766 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SLC44A4Q53GD3 710 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 POLR1DQ9Y2S0 133 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 CLCN6P51797 869 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 PTPROQ16827 1216 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 CERKLQ49MI3 558 aaPredicted RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 MTERF4Q7Z6M4 381 aaKnown RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 SCFD1Q8WVM8 642 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 PMM1Q92871 262 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 ACOX2Q99424 681 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 CAB39Q9Y376 341 aaPredicted RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 ANXA1P04083 346 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 RALAP11233 206 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 MX1P20591 662 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 ST13P50502 369 aaKnown RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 STX1AQ16623 288 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 HLA-DQA1Q5Y7H0 255 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms