RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 DGKIO75912 1065 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 GNAT1P11488 350 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 TECP42680 631 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 CLCN5P51795 746 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 CTDSPL2Q05D32 466 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
CCDC18-208ENST00000479653 MYSM1Q5VVJ2 828 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 C16orf70Q9BSU1 422 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 SMOC2Q9H3U7 446 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 SETD4Q9NVD3 440 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 COL20A1Q9P218 1284 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
CCDC18-208ENST00000479653 ACACBO00763 2458 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 GGPS1O95749 300 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
CCDC18-208ENST00000479653 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 CELF3Q5SZQ8 465 aaKnown RBP13.06□□□□□ -0.32
CCDC18-208ENST00000479653 KBTBD3Q8NAB2 608 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 VN1R2Q8NFZ6 395 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 ATP8B4Q8TF62 1192 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 TMEM47Q9BQJ4 181 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 MLXIPQ9HAP2 919 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
CCDC18-208ENST00000479653 HAX1O00165 279 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 HMMRO75330 724 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 ZFYP08048 801 aaPredicted RBP13.05□□□□□ -0.32
CCDC18-208ENST00000479653 NR3C2P08235 984 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 TOP1P11387 765 aaKnown RBP13.05□□□□□ -0.32
CCDC18-208ENST00000479653 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
CCDC18-208ENST00000479653 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
CCDC18-208ENST00000479653 FAM26DQ5JW98 314 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
CCDC18-208ENST00000479653 S1PR5Q9H228 398 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC18-208ENST00000479653 FRYLO94915 3013 aa13.05□□□□□ -0.32
CCDC18-208ENST00000479653 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 CHRNA1P02708 482 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 PDHBP11177 359 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
CCDC18-208ENST00000479653 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 DUSP6Q16828 381 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
CCDC18-208ENST00000479653 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 MCF2L2Q86YR7 1114 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 SEC62Q99442 399 aaKnown RBP13.04□□□□□ -0.32
CCDC18-208ENST00000479653 CDCA3Q99618 268 aaPredicted RBP13.04□□□□□ -0.32
CCDC18-208ENST00000479653 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
CCDC18-208ENST00000479653 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 CHD6Q8TD26 2715 aa13.04□□□□□ -0.32
CCDC18-208ENST00000479653 FSD2A1L4K1 749 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 C2CD4DB7Z1M9 353 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 PI15O43692 258 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 LGALS2P05162 132 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 ASGR2P07307 311 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 HOXC8P31273 242 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 NOVP48745 357 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 SP2Q02086 613 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 LPIN1Q14693 890 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
CCDC18-208ENST00000479653 KCNV1Q6PIU1 500 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 CPVLQ9H3G5 476 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 ABCB11O95342 1321 aa13.03□□□□□ -0.32
CCDC18-208ENST00000479653 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.33
CCDC18-208ENST00000479653 CFBP00751 764 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
CCDC18-208ENST00000479653 ERVFC1P60507 584 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 ST3GAL2Q16842 350 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 SYCE2Q6PIF2 218 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 DTWD2Q8NBA8 298 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.33
CCDC18-208ENST00000479653 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
CCDC18-208ENST00000479653 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 DLL3Q9NYJ7 618 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 PCDHB12Q9Y5F1 795 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 R4GN57 208 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.33
CCDC18-208ENST00000479653 STK25O00506 426 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
CCDC18-208ENST00000479653 STAG3L1P0CL83 205 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 AOC1P19801 751 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 UBA1P22314 1058 aaKnown RBP13.01□□□□□ -0.33
CCDC18-208ENST00000479653 CDC37Q16543 378 aaPredicted RBP13.01□□□□□ -0.33
CCDC18-208ENST00000479653 RSPO4Q2I0M5 234 aaPredicted RBP13.01□□□□□ -0.33
CCDC18-208ENST00000479653 CES5AQ6NT32 575 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 RSPH3Q86UC2 560 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms