RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 EMID1Q96A84 441 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 NCOA5Q9HCD5 579 aaKnown RBP10.37□□□□□ -0.75
CMTM1-208ENST00000479381 RIC8AQ9NPQ8 531 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 WDR70Q9NW82 654 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 BARHL2Q9NY43 387 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 MSRAQ9UJ68 235 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 SCN10AQ9Y5Y9 1956 aa10.37□□□□□ -0.75
CMTM1-208ENST00000479381 H3BRB1 525 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 RGS20O76081 388 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 F2P00734 622 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 GNAT1P11488 350 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 SMAD3P84022 425 aaKnown RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 ARHGAP4P98171 946 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 SP2Q02086 613 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 AP3B2Q13367 1082 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 PFKFB3Q16875 520 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 REXO1Q8N1G1 1221 aaKnown RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 ATP6V0A1Q93050 837 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 INPP4AQ96PE3 977 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 USP26Q9BXU7 913 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 WNT8AQ9H1J5 351 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
CMTM1-208ENST00000479381 AZI2Q9H6S1 392 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 GTF2IRD1Q9UHL9 959 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 SLC4A7Q9Y6M7 1214 aa10.36□□□□□ -0.75
CMTM1-208ENST00000479381 FRMPD4Q14CM0 1322 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 KAT6AQ92794 2004 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 BACH1O14867 736 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 CDKL5O76039 1030 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 PFKMP08237 780 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 CTSHP09668 335 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 XBP1P17861 261 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 DNAJB2P25686 324 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 ICAM3P32942 547 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 RFC2P35250 354 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 TCF7P36402 384 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-208ENST00000479381 THPOP40225 353 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 IGBP1P78318 339 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 RAB30Q15771 203 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 LRRC8DQ7L1W4 858 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 TRIM50Q86XT4 487 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 AFAP1L1Q8TED9 768 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 KAT2BQ92831 832 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 KCNB2Q92953 911 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 RNF26Q9BY78 433 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-208ENST00000479381 JPH1Q9HDC5 661 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-208ENST00000479381 JADE2Q9NQC1 790 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
CMTM1-208ENST00000479381 TRIP12Q14669 1992 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-208ENST00000479381 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 GRXCR1A8MXD5 290 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 KIF28PB7ZC32 967 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 PRPF3O43395 683 aaKnown RBP10.34□□□□□ -0.75
CMTM1-208ENST00000479381 IQCF3P0C7M6 154 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SMIM10L2AP0DMW4 78 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SMIM10L2BP0DMW5 78 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 FOSL2P15408 326 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SELPP16109 830 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 PDIA3P30101 505 aaKnown RBP10.34□□□□□ -0.75
CMTM1-208ENST00000479381 ZNF200P98182 395 aaPredicted RBP10.34□□□□□ -0.75
CMTM1-208ENST00000479381 PTK7Q13308 1070 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 ANKRD1Q15327 319 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 TYW1BQ6NUM6 668 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 CKAP2LQ8IYA6 745 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SEPT1Q8WYJ6 367 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
CMTM1-208ENST00000479381 GAS2L1Q99501 681 aaPredicted RBP10.34□□□□□ -0.75
CMTM1-208ENST00000479381 GPR20Q99678 358 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SENP7Q9BQF6 1050 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 MXRA8Q9BRK3 442 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SLC9A2Q9UBY0 812 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SAMM50Q9Y512 469 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 SCN5AQ14524 2016 aa10.34□□□□□ -0.75
CMTM1-208ENST00000479381 MAFGO15525 162 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 MARCH6O60337 910 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 DEXIO95424 95 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 ATP2A2P16615 1042 aaKnown RBP10.33□□□□□ -0.76
CMTM1-208ENST00000479381 IFNAR1P17181 557 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 ITGB5P18084 799 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 FOSBP53539 338 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 PPFIA1Q13136 1202 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 TOB2Q14106 344 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-208ENST00000479381 CEP55Q53EZ4 464 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 TRMT1LQ7Z2T5 733 aaKnown RBP10.33□□□□□ -0.76
CMTM1-208ENST00000479381 RSPH3Q86UC2 560 aa10.33□□□□□ -0.76
CMTM1-208ENST00000479381 SESTD1Q86VW0 696 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms