RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PRR16Q569H4 304 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 PLPPR4Q7Z2D5 763 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 SH3RF1Q7Z6J0 888 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 NEK8Q86SG6 692 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 SMAP1Q8IYB5 467 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-217ENST00000479161 C7orf31Q8N865 590 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 GJB4Q9NTQ9 266 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 TBX3O15119 743 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
C9orf3-217ENST00000479161 SYN1P17600 705 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 ACTR2P61160 394 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 KRT76Q01546 638 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 MFSD5Q6N075 450 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 FAM184AQ8NB25 1140 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 RDM1Q8NG50 284 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 OXER1Q8TDS5 423 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 SLC5A5Q92911 643 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 FAM20AQ96MK3 541 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 FOXP1Q9H334 677 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-217ENST00000479161 ERAP1Q9NZ08 941 aa17.54■□□□□ 0.4
C9orf3-217ENST00000479161 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-217ENST00000479161 MSH4O15457 936 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 ZNF286BP0CG31 522 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 GNAT1P11488 350 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 CUL4AQ13619 759 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 INF2Q27J81 1249 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 ABHD15Q6UXT9 468 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 DIS3L2Q8IYB7 885 aaKnown RBP17.53■□□□□ 0.4
C9orf3-217ENST00000479161 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 AFAP1L1Q8TED9 768 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 NOC4LQ9BVI4 516 aaKnown RBP17.53■□□□□ 0.4
C9orf3-217ENST00000479161 PRDM5Q9NQX1 630 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-217ENST00000479161 HDAC6Q9UBN7 1215 aa17.53■□□□□ 0.4
C9orf3-217ENST00000479161 NRCAMQ92823 1304 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 SZT2Q5T011 3432 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 BTBD18B2RXH4 712 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
C9orf3-217ENST00000479161 ITGB8P26012 769 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 ADAM17P78536 824 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 PTK7Q13308 1070 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-217ENST00000479161 BFSP2Q13515 415 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 PTGISQ16647 500 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 FAM47CQ5HY64 1035 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-217ENST00000479161 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 PIK3AP1Q6ZUJ8 805 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 ETNPPLQ8TBG4 499 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 HIPK3Q9H422 1215 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 KCNMB3Q9NPA1 279 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 TRMT13Q9NUP7 481 aaKnown RBP17.52■□□□□ 0.4
C9orf3-217ENST00000479161 TCEAL9Q9UHQ7 104 aa17.52■□□□□ 0.4
C9orf3-217ENST00000479161 COLQQ9Y215 455 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-217ENST00000479161 PSMD10O75832 226 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 CCNE2O96020 404 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 RPLP2P05387 115 aaKnown RBP17.51■□□□□ 0.39
C9orf3-217ENST00000479161 SFNP31947 248 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 NR5A1Q13285 461 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 MIS18BP1Q6P0N0 1132 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 TMEM199Q8N511 208 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 CCDC155Q8N6L0 562 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 BADQ92934 168 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 SNX21Q969T3 373 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 PCYT2Q99447 389 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
C9orf3-217ENST00000479161 TELO2Q9Y4R8 837 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 PCDHA10Q9Y5I2 948 aa17.51■□□□□ 0.39
C9orf3-217ENST00000479161 WDR64B1ANS9 1081 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 SORBS3O60504 671 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 CAND2O75155 1236 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 TDP2O95551 362 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 U2AF2P26368 475 aaKnown RBP eCLIP17.5■□□□□ 0.393e-8■□□□□ 10.3
C9orf3-217ENST00000479161 RFC2P35250 354 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 TRAPPC10P48553 1259 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 STAT5BP51692 787 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 LETM2Q2VYF4 491 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 FAM160B1Q5W0V3 765 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 RPAINQ86UA6 219 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 GLG1Q92896 1179 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 INTS4Q96HW7 963 aaKnown RBP17.5■□□□□ 0.39
C9orf3-217ENST00000479161 RNPEPQ9H4A4 650 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
C9orf3-217ENST00000479161 MAFBQ9Y5Q3 323 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-217ENST00000479161 C17orf102A2RUQ5 167 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 RRN3P2A6NIE6 340 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 GAS7O60861 476 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 PFKMP08237 780 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 SMIM10L2AP0DMW4 78 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 SMIM10L2BP0DMW5 78 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 JAK3P52333 1124 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 MDM2Q00987 491 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-217ENST00000479161 SP4Q02446 784 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms