RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 NRCAMQ92823 1304 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 XIRP2A4UGR9 3374 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 SPDYE3A6NKU9 549 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
VCL-205ENST00000478896 CALM1P0DP23 149 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 CALM2P0DP24 149 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 CALM3P0DP25 149 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 KCNA5P22460 613 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 MARK3P27448 753 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 RAB11FIP4Q86YS3 637 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 CMTR1Q8N1G2 835 aaKnown RBP15.22■□□□□ 0.03
VCL-205ENST00000478896 SRBD1Q8N5C6 995 aaKnown RBP15.22■□□□□ 0.03
VCL-205ENST00000478896 GPRASP2Q96D09 838 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 PSTPIP2Q9H939 334 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 PKD2L1Q9P0L9 805 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
VCL-205ENST00000478896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.21■□□□□ 0.03
VCL-205ENST00000478896 GHRP10912 638 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 PPFIA1Q13136 1202 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 GPM6BQ13491 265 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 MTMR1Q13613 665 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 UBE2SQ16763 222 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 TIGD5Q53EQ6 642 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 TAF2Q6P1X5 1199 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 EP400NLQ6ZTU2 488 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 RSPH3Q86UC2 560 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 CCDC82Q8N4S0 544 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 GLG1Q92896 1179 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 MRPL38Q96DV4 380 aaKnown RBP15.21■□□□□ 0.03
VCL-205ENST00000478896 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 EPHX3Q9H6B9 360 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 EHMT1Q9H9B1 1298 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 ERAP1Q9NZ08 941 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 COL4A6Q14031 1691 aa15.21■□□□□ 0.03
VCL-205ENST00000478896 REV3LO60673 3130 aa15.21■□□□□ 0.02
VCL-205ENST00000478896 KCNA2P16389 499 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 ADAM17P78536 824 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 FAM26DQ5JW98 314 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 TMEM192Q8IY95 271 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 SEPT1Q8WYJ6 367 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 TUBE1Q9UJT0 475 aa15.2■□□□□ 0.02
VCL-205ENST00000478896 hCG_1642624A0A1W2PR95 340 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 H3BNC9 293 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 SLC27A2O14975 620 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 ATP9AO75110 1047 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 ITGB5P18084 799 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
VCL-205ENST00000478896 CTNNB1P35222 781 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 LIFRP42702 1097 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 IGBP1P78318 339 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 GRIK4Q16099 956 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 LEXMQ3ZCV2 418 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 TMEM31Q5JXX7 168 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 RUFY4Q6ZNE9 571 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 FIBCD1Q8N539 461 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 BANK1Q8NDB2 785 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 FAM122AQ96E09 287 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 LRRC2Q9BYS8 371 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 LSG1Q9H089 658 aaKnown RBP15.19■□□□□ 0.02
VCL-205ENST00000478896 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 HCN4Q9Y3Q4 1203 aa15.19■□□□□ 0.02
VCL-205ENST00000478896 NCOR1O75376 2440 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.18■□□□□ 0.02
VCL-205ENST00000478896 CHRNA1P02708 482 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 IL9P15248 144 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 CREB3L3Q68CJ9 461 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 PTCRAQ6ISU1 281 aaPredicted RBP15.18■□□□□ 0.02
VCL-205ENST00000478896 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
VCL-205ENST00000478896 DNAJB3Q8WWF6 145 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 IL17RAQ96F46 866 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 JPH1Q9HDC5 661 aaPredicted RBP15.18■□□□□ 0.02
VCL-205ENST00000478896 PCDHA6Q9UN73 950 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 PCDHA8Q9Y5H6 950 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 UBIAD1Q9Y5Z9 338 aa15.18■□□□□ 0.02
VCL-205ENST00000478896 ADGRA3Q8IWK6 1321 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 M0QZ92 97 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 PLA2G5P39877 138 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 MGAT3Q09327 533 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 RPAINQ86UA6 219 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 FANCBQ8NB91 859 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 LRFN3Q9BTN0 628 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
VCL-205ENST00000478896 NSUN3Q9H649 340 aaKnown RBP15.17■□□□□ 0.02
VCL-205ENST00000478896 AZI2Q9H6S1 392 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 JADE2Q9NQC1 790 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 RWDD3Q9Y3V2 267 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 CDY2AQ9Y6F7 541 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 BRWD1Q9NSI6 2320 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 ATG2AQ2TAZ0 1938 aa15.17■□□□□ 0.02
VCL-205ENST00000478896 FAM86C2PA6NEL3 165 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms