RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
AFF4-208ENST00000478588 MYOTQ9UBF9 498 aa6.3□□□□□ -1.4
AFF4-208ENST00000478588 RBPJLQ9UBG7 517 aa6.3□□□□□ -1.4
AFF4-208ENST00000478588 CDK11AQ9UQ88 783 aaPredicted RBP6.3□□□□□ -1.4
AFF4-208ENST00000478588 FMN1Q68DA7 1419 aa6.3□□□□□ -1.4
AFF4-208ENST00000478588 ITGA1P56199 1179 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 RBM10P98175 930 aaKnown RBP6.29□□□□□ -1.4
AFF4-208ENST00000478588 GRIN1Q05586 938 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 KIZQ2M2Z5 673 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 CARFQ8N187 725 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 KYQ8NBH2 561 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 TOE1Q96GM8 510 aaKnown RBP6.29□□□□□ -1.4
AFF4-208ENST00000478588 ZFYVE21Q9BQ24 234 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 DTLQ9NZJ0 730 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 ASH2LQ9UBL3 628 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 PCDHA8Q9Y5H6 950 aa6.29□□□□□ -1.4
AFF4-208ENST00000478588 KRIT1O00522 736 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 NKX3-2P78367 333 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 SF3A1Q15459 793 aaKnown RBP6.28□□□□□ -1.4
AFF4-208ENST00000478588 NT5DC1Q5TFE4 455 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 TEPPQ6URK8 271 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 ZC3H18Q86VM9 953 aaKnown RBP6.28□□□□□ -1.4
AFF4-208ENST00000478588 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.28□□□□□ -1.4
AFF4-208ENST00000478588 ZSWIM3Q96MP5 696 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 RAPGEFL1Q9UHV5 662 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 TELO2Q9Y4R8 837 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 RAPGEF6Q8TEU7 1601 aa6.28□□□□□ -1.4
AFF4-208ENST00000478588 NUP153P49790 1475 aaKnown RBP6.28□□□□□ -1.4
AFF4-208ENST00000478588 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
AFF4-208ENST00000478588 GNAT1P11488 350 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 THBS2P35442 1172 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 SARSP49591 514 aaKnown RBP6.27□□□□□ -1.41
AFF4-208ENST00000478588 ADAM9Q13443 819 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 RTP5Q14D33 572 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 SP8Q8IXZ3 490 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 LILRB2Q8N423 598 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 PTPRN2Q92932 1015 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 KISS1RQ969F8 398 aaPredicted RBP6.27□□□□□ -1.41
AFF4-208ENST00000478588 MRPS23Q9Y3D9 190 aaKnown RBP6.27□□□□□ -1.41
AFF4-208ENST00000478588 MAP3K4Q9Y6R4 1608 aa6.27□□□□□ -1.41
AFF4-208ENST00000478588 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
AFF4-208ENST00000478588 TUSC3Q13454 348 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 HABP4Q5JVS0 413 aaKnown RBP6.26□□□□□ -1.41
AFF4-208ENST00000478588 PHF19Q5T6S3 580 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 TMC5Q6UXY8 1006 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 ZNF761Q86XN6 746 aaPredicted RBP6.26□□□□□ -1.41
AFF4-208ENST00000478588 SH3RF2Q8TEC5 729 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 SREK1Q8WXA9 508 aaKnown RBP6.26□□□□□ -1.41
AFF4-208ENST00000478588 MKL1Q969V6 931 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 IPO9Q96P70 1041 aaKnown RBP6.26□□□□□ -1.41
AFF4-208ENST00000478588 NTMQ9P121 344 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 PCDHA9Q9Y5H5 950 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 NEO1Q92859 1461 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 TSPOAP1O95153 1857 aa6.26□□□□□ -1.41
AFF4-208ENST00000478588 FAM47E-STBD1D6RA91 191 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 DDX3XO00571 662 aaKnown RBP eCLIP6.25□□□□□ -1.41
AFF4-208ENST00000478588 PRICKLE3O43900 615 aaPredicted RBP6.25□□□□□ -1.41
AFF4-208ENST00000478588 NOBOXO60393 691 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 SRGAP2CP0DJJ0 459 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 SPIRE1Q08AE8 756 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 PRR31Q5SQ13 230 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 SOGA3Q5TF21 947 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 MCTP2Q6DN12 878 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
AFF4-208ENST00000478588 PROSER1Q86XN7 944 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 PCDH19Q8TAB3 1148 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 UHMK1Q8TAS1 419 aaKnown RBP6.25□□□□□ -1.41
AFF4-208ENST00000478588 PHOSPHO1Q8TCT1 267 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 ADAMTS17Q8TE56 1095 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 DDX1Q92499 740 aaKnown RBP6.25□□□□□ -1.41
AFF4-208ENST00000478588 RELTQ969Z4 430 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 ALG1Q9BT22 464 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 CD244Q9BZW8 370 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 DSEQ9UL01 958 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 DUSP10Q9Y6W6 482 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 CFAP43Q8NDM7 1665 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 CLIP1P30622 1438 aa6.25□□□□□ -1.41
AFF4-208ENST00000478588 ARHGAP35Q9NRY4 1499 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 AQP7O14520 342 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 MAFKO60675 156 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 CRTAMO95727 393 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 RPL13P26373 211 aaKnown RBP6.24□□□□□ -1.41
AFF4-208ENST00000478588 MLLT6P55198 1093 aaPredicted RBP6.24□□□□□ -1.41
AFF4-208ENST00000478588 GUCY1A3Q02108 690 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 PAK1Q13153 545 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 NFIXQ14938 502 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 LONRF2Q1L5Z9 754 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 DPH6Q7L8W6 267 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 MAMDC2Q7Z304 686 aaPredicted RBP6.24□□□□□ -1.41
AFF4-208ENST00000478588 FERMT3Q86UX7 667 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 TTLL6Q8N841 843 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 OSBPL2Q9H1P3 480 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 SLC52A2Q9HAB3 445 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 PCDH18Q9HCL0 1135 aa6.24□□□□□ -1.41
AFF4-208ENST00000478588 NGRNQ9NPE2 291 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms