RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
TRAIP-206ENST00000477546 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
TRAIP-206ENST00000477546 GPR161Q8N6U8 529 aaKnown RBP12.2□□□□□ -0.46
TRAIP-206ENST00000477546 EMID1Q96A84 441 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-206ENST00000477546 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
TRAIP-206ENST00000477546 DCDC2BA2VCK2 349 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 PRR5-ARHGAP8B1AHC4 643 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 DGKIO75912 1065 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 TECP42680 631 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 LMNB2Q03252 620 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 KCNC3Q14003 757 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 SBK1Q52WX2 424 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 RNF207Q6ZRF8 634 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 CMTR2Q8IYT2 770 aaKnown RBP12.19□□□□□ -0.46
TRAIP-206ENST00000477546 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 OSBP2Q969R2 916 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 NECTIN4Q96NY8 510 aa12.19□□□□□ -0.46
TRAIP-206ENST00000477546 MYH4Q9Y623 1939 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 M0R2C6 588 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 GPAA1O43292 621 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 HOXD8P13378 290 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-206ENST00000477546 MCCP23508 829 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 HOXC8P31273 242 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 RPS6P62753 249 aaKnown RBP12.18□□□□□ -0.46
TRAIP-206ENST00000477546 UBE3AQ05086 875 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 ZDHHC14Q8IZN3 488 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 ZNF444Q8N0Y2 327 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-206ENST00000477546 STK11IPQ8N1F8 1099 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 RASGRP4Q8TDF6 673 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
TRAIP-206ENST00000477546 APOL5Q9BWW9 433 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 RANBP17Q9H2T7 1088 aaKnown RBP12.18□□□□□ -0.46
TRAIP-206ENST00000477546 POMKQ9H5K3 350 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
TRAIP-206ENST00000477546 C17orf102A2RUQ5 167 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 GNAT2P19087 354 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 TDO2P48775 406 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 RCSD1Q6JBY9 416 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 PDE12Q6L8Q7 609 aaKnown RBP12.17□□□□□ -0.46
TRAIP-206ENST00000477546 SEPT14Q6ZU15 432 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 TDRD5Q8NAT2 981 aaKnown RBP12.17□□□□□ -0.46
TRAIP-206ENST00000477546 CLEC4DQ8WXI8 215 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 RIN2Q8WYP3 895 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-206ENST00000477546 ZNF287Q9HBT7 754 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 ERVK-5Q9HDB9 667 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-206ENST00000477546 LIMD1Q9UGP4 676 aa12.17□□□□□ -0.46
TRAIP-206ENST00000477546 MYO10Q9HD67 2058 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 APPP05067 770 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 SP9P0CG40 484 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 LAMC2Q13753 1193 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-206ENST00000477546 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 FAM26DQ5JW98 314 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 CES5AQ6NT32 575 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 SIX5Q8N196 739 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
TRAIP-206ENST00000477546 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-206ENST00000477546 NCDNQ9UBB6 729 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
TRAIP-206ENST00000477546 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 ENPP3O14638 875 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 TREHO43280 583 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 KINO60870 393 aaKnown RBP12.15□□□□□ -0.46
TRAIP-206ENST00000477546 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 ITIH3Q06033 890 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 VARS2Q5ST30 1063 aaKnown RBP12.15□□□□□ -0.46
TRAIP-206ENST00000477546 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 RILPL2Q969X0 211 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
TRAIP-206ENST00000477546 FBXL21Q9UKT6 434 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
TRAIP-206ENST00000477546 MINDY4BA8MYZ0 360 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 FSCN2O14926 492 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 PRDM1O75626 825 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 TSPY3P0CV98 308 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 TSPY8P0CW00 308 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 BORCS6Q96GS4 357 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 NACAP1Q9BZK3 213 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 DUSP12Q9UNI6 340 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
TRAIP-206ENST00000477546 TTC3P53804 2025 aa12.13□□□□□ -0.47
TRAIP-206ENST00000477546 SOBPA7XYQ1 873 aa12.13□□□□□ -0.47
TRAIP-206ENST00000477546 SMIM10L2AP0DMW4 78 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms