RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 BTBD8Q5XKL5 378 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 CD300LDQ6UXZ3 194 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 RNF180Q86T96 592 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 ZC3H18Q86VM9 953 aaKnown RBP4.74□□□□□ -1.65
TARDBP-208ENST00000477447 NOSTRINQ8IVI9 506 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 IGDCC3Q8IVU1 814 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 UBR7Q8N806 425 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 TTLL11Q8NHH1 800 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 SMARCC2Q8TAQ2 1214 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 CHAC2Q8WUX2 184 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 CLEC4DQ8WXI8 215 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 TOE1Q96GM8 510 aaKnown RBP4.74□□□□□ -1.65
TARDBP-208ENST00000477447 PPP1R16BQ96T49 567 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 BOCQ9BWV1 1114 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 MTFR1LQ9H019 292 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.74□□□□□ -1.65
TARDBP-208ENST00000477447 SPC25Q9HBM1 224 aa4.74□□□□□ -1.65
TARDBP-208ENST00000477447 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 ANKRD62A6NC57 917 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 PRAMEF25A6NGN4 478 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 FAM90A27PA6NNH2 459 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 GAS7O60861 476 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 DNAJC6O75061 913 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 CLASP2O75122 1294 aaKnown RBP4.73□□□□□ -1.65
TARDBP-208ENST00000477447 CYP2C8P10632 490 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 ATF2P15336 505 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 PTPN1P18031 435 aaKnown RBP4.73□□□□□ -1.65
TARDBP-208ENST00000477447 GLDCP23378 1020 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 GJA4P35212 333 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 NKX3-2P78367 333 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 ARHGAP44Q17R89 818 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 PAN2Q504Q3 1202 aaKnown RBP4.73□□□□□ -1.65
TARDBP-208ENST00000477447 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 TEPPQ6URK8 271 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 ATG14Q6ZNE5 492 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 ANKLE2Q86XL3 938 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 NXPE1Q8N323 547 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 POU5F2Q8N7G0 328 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 OR2W6PQ8NHA6 318 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 CPA5Q8WXQ8 436 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 CAAP1Q9H8G2 361 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 B4GALT6Q9UBX8 382 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 ZKSCAN5Q9Y2L8 839 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 IRAK3Q9Y616 596 aa4.73□□□□□ -1.65
TARDBP-208ENST00000477447 H7C1D1 291 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 LRG1P02750 347 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 FAHP16930 419 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 PI3P19957 117 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 IGFBP6P24592 240 aaPredicted RBP4.72□□□□□ -1.65
TARDBP-208ENST00000477447 IL2P60568 153 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 SART3Q15020 963 aaKnown RBP4.72□□□□□ -1.65
TARDBP-208ENST00000477447 PKN1Q16512 942 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 CR1LQ2VPA4 569 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 TMC5Q6UXY8 1006 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 OTOP1Q7RTM1 612 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 B3GNT8Q7Z7M8 397 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 SIGLEC10Q96LC7 697 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 FMNL2Q96PY5 1086 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 ORAI3Q9BRQ5 295 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 PCIF1Q9H4Z3 704 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 NGRNQ9NPE2 291 aaKnown RBP4.72□□□□□ -1.65
TARDBP-208ENST00000477447 KCNH7Q9NS40 1196 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 IFT57Q9NWB7 429 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 THG1LQ9NWX6 298 aaKnown RBP4.72□□□□□ -1.65
TARDBP-208ENST00000477447 RBPJLQ9UBG7 517 aa4.72□□□□□ -1.65
TARDBP-208ENST00000477447 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 ACOT7O00154 380 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 TSPAN15O95858 294 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 F2P00734 622 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 KRT1P04264 644 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 VIL1P09327 827 aaKnown RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 C1QTNF9P0C862 333 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 MED14OSP0DP75 135 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 ATP2A2P16615 1042 aaKnown RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 SCNN1BP51168 640 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 FOXO4P98177 505 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 DSG1Q02413 1049 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 STRN3Q13033 797 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 SSPNQ14714 243 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 TMEM132BQ14DG7 1078 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 SEC23AQ15436 765 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 ZNF174Q15697 407 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 DDX46Q7L014 1031 aaKnown RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 KRT26Q7Z3Y9 468 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 KIF18BQ86Y91 864 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 ZSWIM3Q96MP5 696 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 GPR101Q96P66 508 aaPredicted RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 SYT3Q9BQG1 590 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 TMX1Q9H3N1 280 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 H2AFY2Q9P0M6 372 aaPredicted RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 CNOT6Q9ULM6 557 aaKnown RBP4.71□□□□□ -1.66
TARDBP-208ENST00000477447 B3GALT1Q9Y5Z6 326 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 PMF1-BGLAPU3KQ54 211 aa4.71□□□□□ -1.66
TARDBP-208ENST00000477447 C4BPAP04003 597 aaKnown RBP4.7□□□□□ -1.66
TARDBP-208ENST00000477447 MMEP08473 750 aa4.7□□□□□ -1.66
TARDBP-208ENST00000477447 ZBTB48P10074 688 aaPredicted RBP4.7□□□□□ -1.66
TARDBP-208ENST00000477447 YBX3P16989 372 aaKnown RBP eCLIP4.7□□□□□ -1.668e-13■□□□□ 8.1
TARDBP-208ENST00000477447 KIF11P52732 1056 aa4.7□□□□□ -1.66
TARDBP-208ENST00000477447 ZNF124Q15973 351 aa4.7□□□□□ -1.66
TARDBP-208ENST00000477447 CD276Q5ZPR3 534 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms