RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CAMK1Q14012 370 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 TRIM67Q6ZTA4 783 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-213ENST00000476777 PBXIP1Q96AQ6 731 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-213ENST00000476777 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-213ENST00000476777 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
BRCA1-213ENST00000476777 ADGRA3Q8IWK6 1321 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 ST18O60284 1047 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 EYA4O95677 639 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 CHRNA1P02708 482 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 MMP1P03956 469 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 GNAT1P11488 350 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 NT5C2P49902 561 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 PDE1AP54750 535 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 TCF15Q12870 199 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 ADAM15Q13444 863 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 MSLNLQ96KJ4 702 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
BRCA1-213ENST00000476777 NOP56O00567 594 aaKnown RBP13.2□□□□□ -0.3
BRCA1-213ENST00000476777 CSPG5O95196 566 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 CCND2P30279 289 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 PKN1Q16512 942 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 TRIM50Q86XT4 487 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 SAMD3Q8N6K7 520 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 LMBR1Q8WVP7 490 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 ZNF689Q96CS4 500 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-213ENST00000476777 GPR20Q99678 358 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 PRRX2Q99811 253 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 PLVAPQ9BX97 442 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
BRCA1-213ENST00000476777 CLEC1BQ9P126 229 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 DMDP11532 3685 aa13.2□□□□□ -0.3
BRCA1-213ENST00000476777 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-213ENST00000476777 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 B4E1Z4 1266 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 LOC730098B7Z3J9 87 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ENPP3O14638 875 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ZNF213O14771 459 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ZBTB5O15062 677 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 GHRP10912 638 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 DNAJB1P25685 340 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ZXDAP98168 799 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ARHGAP4P98171 946 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-213ENST00000476777 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 SMRP1Q8NCR6 262 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 ZSWIM5Q9P217 1185 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 TELO2Q9Y4R8 837 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 DOCK5Q9H7D0 1870 aa13.19□□□□□ -0.3
BRCA1-213ENST00000476777 DCHS1Q96JQ0 3298 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 DGKIO75912 1065 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 ICAM3P32942 547 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 NDUFV1P49821 464 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 MGAT3Q09327 533 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 COASYQ13057 564 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 NEDD9Q14511 834 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 LPIN1Q14693 890 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 RUFY4Q6ZNE9 571 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 ADGRD2Q7Z7M1 963 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 SUGP1Q8IWZ8 645 aaKnown RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
BRCA1-213ENST00000476777 INPP4AQ96PE3 977 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
BRCA1-213ENST00000476777 NRCAMQ92823 1304 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 KMT2EQ8IZD2 1858 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 SPATA31C2B4DYI2 1134 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 ITGB1P05556 798 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
BRCA1-213ENST00000476777 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 UTP14CQ5TAP6 766 aaKnown RBP13.17□□□□□ -0.3
BRCA1-213ENST00000476777 TAF2Q6P1X5 1199 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 CRIPAKQ8N1N5 446 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 SPPL3Q8TCT6 385 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 P2RX5Q93086 422 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 PPP2R3CQ969Q6 453 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
BRCA1-213ENST00000476777 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
BRCA1-213ENST00000476777 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
BRCA1-213ENST00000476777 ZNF292O60281 2723 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms