RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PSMC6P62333 389 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 RILPL1Q5EBL4 403 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 BRAPQ7Z569 592 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 SMAP1Q8IYB5 467 aaPredicted RBP33.4■■■□□ 2.94
HOXB3-208ENST00000476342 KAT2BQ92831 832 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 C16orf70Q9BSU1 422 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 ZNF215Q9UL58 517 aaPredicted RBP33.4■■■□□ 2.94
HOXB3-208ENST00000476342 MROH7Q68CQ1 1323 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 ARVCFO00192 962 aa33.39■■■□□ 2.94
HOXB3-208ENST00000476342 WNT7AO00755 349 aa33.39■■■□□ 2.94
HOXB3-208ENST00000476342 PSMD10O75832 226 aa33.39■■■□□ 2.94
HOXB3-208ENST00000476342 CALCRLQ16602 461 aa33.39■■■□□ 2.94
HOXB3-208ENST00000476342 UTP14CQ5TAP6 766 aaKnown RBP33.39■■■□□ 2.94
HOXB3-208ENST00000476342 CCNE2O96020 404 aa33.38■■■□□ 2.93
HOXB3-208ENST00000476342 RTP1P59025 263 aa33.38■■■□□ 2.93
HOXB3-208ENST00000476342 DPF3Q92784 378 aa33.38■■■□□ 2.93
HOXB3-208ENST00000476342 GJA10Q969M2 543 aa33.38■■■□□ 2.93
HOXB3-208ENST00000476342 AZI2Q9H6S1 392 aa33.38■■■□□ 2.93
HOXB3-208ENST00000476342 EMSYQ7Z589 1322 aa33.38■■■□□ 2.93
HOXB3-208ENST00000476342 H3BRB1 525 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 ATG7O95352 703 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 PSEN2P49810 448 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 CHMP4BP1P59074 171 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 MFSD10Q14728 455 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 MIS18BP1Q6P0N0 1132 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 SLC43A3Q8NBI5 491 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 TUT1Q9H6E5 874 aaKnown RBP33.37■■■□□ 2.93
HOXB3-208ENST00000476342 MTMR6Q9Y217 621 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 ATP11BQ9Y2G3 1177 aa33.37■■■□□ 2.93
HOXB3-208ENST00000476342 WDR64B1ANS9 1081 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 ZNF174Q15697 407 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 KIAA0753Q2KHM9 967 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 NBPF20Q3BBV1 942 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 TRIM60Q495X7 471 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 NFRKBQ6P4R8 1299 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 FERMT3Q86UX7 667 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 HAS1Q92839 578 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 GLG1Q92896 1179 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 SMARCAD1Q9H4L7 1026 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 SAMM50Q9Y512 469 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 GRIN2DO15399 1336 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 EVI5O60447 810 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 SFNP31947 248 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 TOB1P50616 345 aaPredicted RBP33.36■■■□□ 2.93
HOXB3-208ENST00000476342 JAK3P52333 1124 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 ABHD15Q6UXT9 468 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 TRIM50Q86XT4 487 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 PCDHA10Q9Y5I2 948 aa33.36■■■□□ 2.93
HOXB3-208ENST00000476342 HAS3O00219 553 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 CHMP2AO43633 222 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 LGR5O75473 907 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 SUPT20HL2P0C7V6 817 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 CDK7P50613 346 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 RDM1Q8NG50 284 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 UNC45AQ9H3U1 944 aa33.35■■■□□ 2.93
HOXB3-208ENST00000476342 BACH1O14867 736 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 PSAPP07602 524 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 PTPN11Q06124 597 aaPredicted RBP33.34■■■□□ 2.93
HOXB3-208ENST00000476342 FAM47CQ5HY64 1035 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 FAM160B1Q5W0V3 765 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 ANKRD33Q7Z3H0 272 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 TOX2Q96NM4 488 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 DISC1Q9NRI5 854 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 ERAP1Q9NZ08 941 aa33.34■■■□□ 2.93
HOXB3-208ENST00000476342 PQBP1O60828 265 aaKnown RBP33.33■■■□□ 2.93
HOXB3-208ENST00000476342 NBR1Q14596 966 aa33.33■■■□□ 2.93
HOXB3-208ENST00000476342 MIER3Q7Z3K6 550 aa33.33■■■□□ 2.93
HOXB3-208ENST00000476342 C7orf31Q8N865 590 aa33.33■■■□□ 2.93
HOXB3-208ENST00000476342 MTMR9Q96QG7 549 aa33.33■■■□□ 2.93
HOXB3-208ENST00000476342 ZSCAN16Q9H4T2 348 aaPredicted RBP33.33■■■□□ 2.93
HOXB3-208ENST00000476342 PCDHB6Q9Y5E3 794 aa33.33■■■□□ 2.93
HOXB3-208ENST00000476342 MYH9P35579 1960 aaKnown RBP33.32■■■□□ 2.92
HOXB3-208ENST00000476342 IGKV6D-21A0A0A0MT36 114 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 DCDC2CA8MYV0 355 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 TLR3O15455 904 aaKnown RBP33.32■■■□□ 2.92
HOXB3-208ENST00000476342 STAT5BP51692 787 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 TLE2Q04725 743 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 PPP2R5CQ13362 524 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 B3GNT9Q6UX72 402 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 PLPPR4Q7Z2D5 763 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 TMEM60Q9H2L4 133 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 VAV3Q9UKW4 847 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 PCDHA12Q9UN75 941 aa33.32■■■□□ 2.92
HOXB3-208ENST00000476342 OR52Z1P0C646 297 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 SLC26A2P50443 739 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 RESTQ13127 1097 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 SESTD1Q86VW0 696 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 C7orf61Q8IZ16 206 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 AFAP1L1Q8TED9 768 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 PCYT2Q99447 389 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 ZNF302Q9NR11 478 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 WDR81Q562E7 1941 aa33.31■■■□□ 2.92
HOXB3-208ENST00000476342 TXKP42681 527 aa33.3■■■□□ 2.92
HOXB3-208ENST00000476342 CCDC60Q8IWA6 550 aaPredicted RBP33.3■■■□□ 2.92
HOXB3-208ENST00000476342 FAM126BQ8IXS8 530 aa33.3■■■□□ 2.92
HOXB3-208ENST00000476342 TTC12Q9H892 705 aaPredicted RBP33.3■■■□□ 2.92
HOXB3-208ENST00000476342 EIF4ENIF1Q9NRA8 985 aaKnown RBP33.3■■■□□ 2.92
HOXB3-208ENST00000476342 NR2E3Q9Y5X4 410 aa33.3■■■□□ 2.92
HOXB3-208ENST00000476342 LAD1O00515 517 aa33.29■■■□□ 2.92
HOXB3-208ENST00000476342 ANP32AP39687 249 aaKnown RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms