RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 SERINC5Q86VE9 423 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 NCOA7Q8NI08 942 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 GDPD5Q8WTR4 605 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 RAD9AQ99638 391 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 MLXIPQ9HAP2 919 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
UBE4B-208ENST00000475795 C17orf102A2RUQ5 167 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 LINC01553A4QN01 128 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 POTEMA6NI47 508 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 RSPH10B2B2RC85 870 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 H3BRB1 525 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 LGALS2P05162 132 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 RSPH10BP0C881 870 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 THPOP40225 353 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 ERVK-21P61565 698 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 MRPS9P82933 396 aaKnown RBP8.32□□□□□ -1.08
UBE4B-208ENST00000475795 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 NEDD9Q14511 834 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 GNPTABQ3T906 1256 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-208ENST00000475795 POTEGQ6S5H5 508 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 METTL7BQ6UX53 244 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 CATIPQ7Z7H3 387 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 MB21D2Q8IYB1 491 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-208ENST00000475795 ATP6V0A1Q93050 837 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 HLA-CQ95604 372 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 INPP4AQ96PE3 977 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-208ENST00000475795 TGS1Q96RS0 853 aaKnown RBP8.32□□□□□ -1.08
UBE4B-208ENST00000475795 TUT1Q9H6E5 874 aaKnown RBP8.32□□□□□ -1.08
UBE4B-208ENST00000475795 COL4A6Q14031 1691 aa8.32□□□□□ -1.08
UBE4B-208ENST00000475795 TTC3P53804 2025 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 SPATA31C2B4DYI2 1134 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 RBAK-RBAKDNI3L0D1 243 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 NOP56O00567 594 aaKnown RBP8.31□□□□□ -1.08
UBE4B-208ENST00000475795 DPYSL4O14531 572 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 SGSM2O43147 1006 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 TREHO43280 583 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 FIBPO43427 364 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 CAND2O75155 1236 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 AMHP03971 560 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 ANTXR2P58335 489 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 PLEKHG4Q58EX7 1191 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 FAM117BQ6P1L5 589 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBE4B-208ENST00000475795 CYFIP1Q7L576 1253 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 DBF4BQ8NFT6 615 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 IGDCC4Q8TDY8 1250 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 PTCD2Q8WV60 388 aaKnown RBP8.31□□□□□ -1.08
UBE4B-208ENST00000475795 MAP3K14Q99558 947 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 GPR20Q99678 358 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 SPZ1Q9BXG8 430 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 RNPEPQ9H4A4 650 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 BCAS3Q9H6U6 928 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 SUGCTQ9HAC7 445 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 MTUS1Q9ULD2 1270 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 INSL6Q9Y581 213 aa8.31□□□□□ -1.08
UBE4B-208ENST00000475795 PIK3CDO00329 1044 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 DDAH1O94760 285 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 SMARCA1P28370 1054 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 HTRA4P83105 476 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-208ENST00000475795 PCNX4Q63HM2 1172 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 XRRA1Q6P2D8 792 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 MYOCDQ8IZQ8 938 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 CTCFLQ8NI51 663 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-208ENST00000475795 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 PIBF1Q8WXW3 757 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 SEPT8Q92599 483 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 MAP4K1Q92918 833 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 CUL5Q93034 780 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 RRP36Q96EU6 259 aaKnown RBP8.3□□□□□ -1.08
UBE4B-208ENST00000475795 SENP7Q9BQF6 1050 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 C17orf80Q9BSJ5 609 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 MTA3Q9BTC8 594 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 C1QTNF1Q9BXJ1 281 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 LY9Q9HBG7 655 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 RTEL1Q9NZ71 1219 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 RAPGEFL1Q9UHV5 662 aa8.3□□□□□ -1.08
UBE4B-208ENST00000475795 ZNF215Q9UL58 517 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-208ENST00000475795 RBM8AQ9Y5S9 174 aaKnown RBP8.3□□□□□ -1.08
UBE4B-208ENST00000475795 KIAA1671Q9BY89 1806 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 MEIS2O14770 477 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 CTSHP09668 335 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 GNAT1P11488 350 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 KIF5BP33176 963 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 GNAQP50148 359 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 ADAM17P78536 824 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 USP17L6PQ6QN14 398 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 TRIM50Q86XT4 487 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 LMBR1Q8WVP7 490 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 TOP1MTQ969P6 601 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 LZTS2Q9BRK4 669 aa8.29□□□□□ -1.08
UBE4B-208ENST00000475795 MYL10Q9BUA6 226 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 419.9 ms