RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 NEK9Q8TD19 979 aa23.1■■□□□ 1.29
NPM3-204ENST00000474993 SEPT1Q8WYJ6 367 aa23.1■■□□□ 1.29
NPM3-204ENST00000474993 CLIC6Q96NY7 704 aa23.1■■□□□ 1.29
NPM3-204ENST00000474993 DISC1Q9NRI5 854 aa23.1■■□□□ 1.29
NPM3-204ENST00000474993 PCDHA10Q9Y5I2 948 aa23.1■■□□□ 1.29
NPM3-204ENST00000474993 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.09■■□□□ 1.29
NPM3-204ENST00000474993 DKC1O60832 514 aaKnown RBP eCLIP23.09■■□□□ 1.29
NPM3-204ENST00000474993 PSAPP07602 524 aa23.09■■□□□ 1.29
NPM3-204ENST00000474993 TRIM32Q13049 653 aa23.09■■□□□ 1.29
NPM3-204ENST00000474993 TRPV1Q8NER1 839 aa23.09■■□□□ 1.29
NPM3-204ENST00000474993 PYM1Q9BRP8 204 aaKnown RBP23.09■■□□□ 1.29
NPM3-204ENST00000474993 CCDC39Q9UFE4 941 aa23.09■■□□□ 1.29
NPM3-204ENST00000474993 GNEQ9Y223 722 aaKnown RBP23.09■■□□□ 1.29
NPM3-204ENST00000474993 POTEMA6NI47 508 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 MCM4P33991 863 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 ACTR2P61160 394 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 ARHGAP1Q07960 439 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 TLK2Q86UE8 772 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 KCTD17Q8N5Z5 321 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 PPTC7Q8NI37 304 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 CALML4Q96GE6 196 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 CCSER1Q9C0I3 900 aa23.08■■□□□ 1.29
NPM3-204ENST00000474993 TCHHQ07283 1943 aa23.08■■□□□ 1.28
NPM3-204ENST00000474993 KDM3AQ9Y4C1 1321 aa23.08■■□□□ 1.28
NPM3-204ENST00000474993 DYNC1LI2O43237 492 aaPredicted RBP23.07■■□□□ 1.28
NPM3-204ENST00000474993 MUTP22033 750 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 CPT1AP50416 773 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 SP4Q02446 784 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 GRIN1Q05586 938 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 RESP18Q5W5W9 173 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 RASSF8Q8NHQ8 419 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 SNX29Q8TEQ0 813 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 MRPS27Q92552 414 aaKnown RBP23.07■■□□□ 1.28
NPM3-204ENST00000474993 COPS5Q92905 334 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 POLR3CQ9BUI4 534 aaPredicted RBP23.07■■□□□ 1.28
NPM3-204ENST00000474993 TUFT1Q9NNX1 390 aa23.07■■□□□ 1.28
NPM3-204ENST00000474993 DDX20Q9UHI6 824 aaKnown RBP23.07■■□□□ 1.28
NPM3-204ENST00000474993 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 ATG7O95352 703 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 CCNE2O96020 404 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
NPM3-204ENST00000474993 CCND3P30281 292 aaPredicted RBP23.06■■□□□ 1.28
NPM3-204ENST00000474993 CCT6AP40227 531 aaKnown RBP23.06■■□□□ 1.28
NPM3-204ENST00000474993 FAM160B1Q5W0V3 765 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 SHC4Q6S5L8 630 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 CCDC73Q6ZRK6 1079 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 CABP7Q86V35 215 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 SH3TC2Q8TF17 1288 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 SYMPKQ92797 1274 aaKnown RBP23.06■■□□□ 1.28
NPM3-204ENST00000474993 EIF2AK1Q9BQI3 630 aaKnown RBP23.06■■□□□ 1.28
NPM3-204ENST00000474993 NT5C3AQ9H0P0 336 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 AZI2Q9H6S1 392 aa23.06■■□□□ 1.28
NPM3-204ENST00000474993 EML1O00423 815 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 ZEB2O60315 1214 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 SORBS3O60504 671 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 SUPT20HL2P0C7V6 817 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 RPA1P27694 616 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 ABHD15Q6UXT9 468 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 FSIP1Q8NA03 581 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 ATP6V0A1Q93050 837 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 GPR20Q99678 358 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 LMBRD1Q9NUN5 540 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 CEP350Q5VT06 3117 aa23.05■■□□□ 1.28
NPM3-204ENST00000474993 BACH1O14867 736 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 KPNA6O60684 536 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 GJA9P57773 515 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 PSMC5P62195 406 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 DGKDQ16760 1214 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 HSDL1Q3SXM5 330 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 SPECC1Q5M775 1068 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
NPM3-204ENST00000474993 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 EPSTI1Q96J88 318 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 HSD17B14Q9BPX1 270 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 BCAS3Q9H6U6 928 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 ZSWIM4Q9H7M6 989 aa23.04■■□□□ 1.28
NPM3-204ENST00000474993 GSTTP1A0A1W2PQM5 241 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 A6NJR5 290 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 TCF7P36402 384 aaPredicted RBP23.03■■□□□ 1.28
NPM3-204ENST00000474993 QARSP47897 775 aaKnown RBP23.03■■□□□ 1.28
NPM3-204ENST00000474993 TMEM63BQ5T3F8 832 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 CCDC34Q96HJ3 373 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.03■■□□□ 1.28
NPM3-204ENST00000474993 UPF3AQ9H1J1 476 aaKnown RBP23.03■■□□□ 1.28
NPM3-204ENST00000474993 SMARCAD1Q9H4L7 1026 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 XPNPEP3Q9NQH7 507 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 ZNF302Q9NR11 478 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 KCNH3Q9ULD8 1083 aa23.03■■□□□ 1.28
NPM3-204ENST00000474993 FAM237AA0A1B0GTK4 181 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 PP2D1A8MPX8 630 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 ADCY6O43306 1168 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 CDC25AP30304 524 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 SLC26A2P50443 739 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 NKX3-2P78367 333 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 TPRNQ4KMQ1 711 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 HYIQ5T013 277 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 SWSAP1Q6NVH7 229 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 TPH2Q8IWU9 490 aa23.02■■□□□ 1.28
NPM3-204ENST00000474993 DYDC2Q96IM9 177 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms